| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1056 |
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| Symbol | |
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| ID | 5104438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 985679 |
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| End bp | 986398 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506952 |
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| Product | LmbE family protein |
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| Protein accession | YP_001191145 |
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| Protein GI | 146303829 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAGGA AACTTCTAGT CATAGGGGCG CATTTGGGAG ATATGGTATG GAGAGCCTCT
GGAACTGTGG CCAAATATAT GAAGCAAGGG AATGAGGTCA GCTTGGTAGC TCTCACCTTC
GGCGAAAGGG GGGAGTCTGG GGGCGCATGG AAGGCGGGAG CCAAGACCGT AGAAGAAGTA
AAGGCAATAA GGAAGAAGGA GGCTGAGTGC GTGAAAGAAT CCCTTGGAAG TCCAGTAATG
GAGTTTATGG ATTGGGGAGA TCACCCTCTG ATATTCAATG AGGAGAGGCT TATCACCATT
GCCAAACTGA TAAGAAAGTA TTCCCCAGAC ATACTCATAA CCCATGGGCC TGACGACAAA
GTTAGACCTG ATCACGTTAA CACAGCAGAG GCTGTACTCA ACGCCGTGAG ATTAGCTGCA
ATAGACGGTC TGAAGCTCGA GTATCCTCCG GTCCCTGAGC CAAGGATATA CGGTTTCGAT
CCTCATGTGG CTGATCAAGT GGGGTTCTAT CCTCACGTCT ACATCAACAT TACCGACGTT
TATGACAAAA AGGTGAAGGC CATGAATTGT CTTCAGTCCC AAAAGAACGA GATTGAATAT
TACCAGCTCA GGGATCAGTT AAGGGGATTA CAGACGAGGA GGTTCGGAAG ATCCTCATAT
TTCAAGTATG CAGAGGCCTT CTACATGTAT AATCCAGTGA TTGGAGAGGA CTTTCCGTGA
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| Protein sequence | MGRKLLVIGA HLGDMVWRAS GTVAKYMKQG NEVSLVALTF GERGESGGAW KAGAKTVEEV
KAIRKKEAEC VKESLGSPVM EFMDWGDHPL IFNEERLITI AKLIRKYSPD ILITHGPDDK
VRPDHVNTAE AVLNAVRLAA IDGLKLEYPP VPEPRIYGFD PHVADQVGFY PHVYINITDV
YDKKVKAMNC LQSQKNEIEY YQLRDQLRGL QTRRFGRSSY FKYAEAFYMY NPVIGEDFP
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