| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1048 |
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| Symbol | |
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| ID | 5104430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 976765 |
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| End bp | 977640 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506944 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001191137 |
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| Protein GI | 146303821 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTAA AAACGGCGTT GCTCTCAAGT AAAACGTTAT TGGTAGGTGC AGTCATTATA
GTGGGATTCA TAGTCACAGC CATTATCTCA GCCCTAGATC TGAAACTTCT CACCCCCTAC
GATCCCAACA AGATTAATTT CGCCCTAGCC AACCTTCCGC CGTCCTCTGC CCACCTGTTC
GGTACTGACA GTGAAGGGAG AGATGTATTT ACAAGAGTTC TGGCTGCTCT TCCCAACGAT
GTGGCTATAC CCTACATTAT TGCCGGCGCC TCTGCCCTTA TAGGTGGACT AGTTGGGATG
GTATCAGGTT ACGTGGGAGG ATTAGTGGAT GAGGGACTCA TGAGGTTCAC CGACATTTTC
CTAGCCTTCC CTGGAATATT GTTGGCCCTA GCCATAAGTA CAATCCTTGG ACAGACTCAC
GTGGCTGAAA GGTTATACTT CAGCATGATA GCCCTTATCG TGGTGAATTG GCCAATTTAC
GCTAGGCTTG TTAGGAGTCA GGTACTTCAG GTGAGGGGAA TGCCCTACAT TACCCTAGCC
AAGGCAGCAG GCTTAACTAG GTGGGAGATC ATGAGGAGAC ACATAATTCC AAATATATTA
TCCCTAGTTA TAGTGTATAT CACGCTGGAT ATGGGAACCA TAATCCTGTT CTACTCTATC
CTGGCCTTCT TTGGCCTAGG CGCTCCTCCT CCCACTCCAG AGTTGGGGAG GATGGTTTAC
GACGGCTTAA CCGCACTGCC AGGGAACTGG TGGTCCTCCG TCTTCCCTGC CCTCACAATA
ACGTTAATGG CCGTAGGCTT CTCACTCTTC GGTGAGGGGC TTAGGGATTA CCTGGATCCA
AGAGGTGGAG ATTATGTCAG AAGAGCTAAC GCTTAG
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| Protein sequence | MSVKTALLSS KTLLVGAVII VGFIVTAIIS ALDLKLLTPY DPNKINFALA NLPPSSAHLF
GTDSEGRDVF TRVLAALPND VAIPYIIAGA SALIGGLVGM VSGYVGGLVD EGLMRFTDIF
LAFPGILLAL AISTILGQTH VAERLYFSMI ALIVVNWPIY ARLVRSQVLQ VRGMPYITLA
KAAGLTRWEI MRRHIIPNIL SLVIVYITLD MGTIILFYSI LAFFGLGAPP PTPELGRMVY
DGLTALPGNW WSSVFPALTI TLMAVGFSLF GEGLRDYLDP RGGDYVRRAN A
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