| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1047 |
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| Symbol | |
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| ID | 5104429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 975701 |
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| End bp | 976768 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506943 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001191136 |
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| Protein GI | 146303820 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCTAG CGAAATTAAT AGGAAAACGT GTGGCTGGGG CGCTCCTAGT TATTTTTGGT
GAGTTAATTC TCGTCTTTTT CTTGGTAAAC GTTGCGGCCC CGAATCCGGC TTCCATATGG
GCTGGCCCAG AGGCTTCACC TGAACAAATA CAGATTATTA CCGAGCTTTA TCATCTTAAC
TCCCCGTGGT ACGTTCAGTT CCTCTATTAT ATCAAGAACT TCTTCACAGG AAATTGGGGG
ATTTCACCCC TTTATCAAAC TCCCGTGATA CAGCTCGTGG AGGAGTACCT TCCTGTTACG
CTTGAGCTTG CGGTAATATC ACTCGTACTC AAGTTGATTA TTGAGATTCC TCTAGGTGTC
CTATCTGGTC TCAAGCCAAA CGGGCTTCTG GACAATGCCA TCAGGATGAT CTACACGATA
ACGAGAAGTG TCCCTCCCTT CTTCGTGGCA CTGGGTCTCC TCCTCGTGTT AGCCTATGAT
GTACACGTAT TCCCCGCATC ATATCCTGTG GATCCAATCC TGGCCCTGAA GGAACCAAAG
TTCGAGATAT ATGACCCATT TAACGGGAAG TATTACCCGT TCTGGCTCCT TGATAACATG
CCCATCCTGA ATGCCCTTCT GGTGGGAGAT TTCAGTGCCT TTGCCTCTGC TCTGGACCAC
GCGATTTTAC CGGCTCTCAG TCTCACCCTC TTCGGTTTCG GTGGAATAAC GAGGCTCTCA
AGAAACTCCA TGATAGAGGC CCTCAACATG GATTACATAA AGACAGCGAG GGCGAAGGGT
TTGAAGGAGA GGGTAATAAT ATTTCGTCAT GCCCTAAGGA ATTCCCTTCT CCCAACCATA
ACTCTCTCCA GCGTAATATT CGCCGGTTCA ATTCAAGGGG CCTTAGTGGT GGAAACAATC
TTTAACTATT ACGGGATGGG GTATTACCTA GCCCAAAGCC TACTTGACCT TGACACTCCT
TCCTTACTAG CAGGGACCGT TGTGGTTACC ATAGTTGTAG TTATCTCTAA CCTTGTCGCA
GATGTGTTGT ACAGTGTGGT AGATCCTAGG GTGAGGGAGA CAACATGA
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| Protein sequence | MGLAKLIGKR VAGALLVIFG ELILVFFLVN VAAPNPASIW AGPEASPEQI QIITELYHLN
SPWYVQFLYY IKNFFTGNWG ISPLYQTPVI QLVEEYLPVT LELAVISLVL KLIIEIPLGV
LSGLKPNGLL DNAIRMIYTI TRSVPPFFVA LGLLLVLAYD VHVFPASYPV DPILALKEPK
FEIYDPFNGK YYPFWLLDNM PILNALLVGD FSAFASALDH AILPALSLTL FGFGGITRLS
RNSMIEALNM DYIKTARAKG LKERVIIFRH ALRNSLLPTI TLSSVIFAGS IQGALVVETI
FNYYGMGYYL AQSLLDLDTP SLLAGTVVVT IVVVISNLVA DVLYSVVDPR VRETT
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