Gene Msed_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1030 
Symbol 
ID5104330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp953591 
End bp954193 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content43% 
IMG OID640506926 
Productmethyltransferase type 12 
Protein accessionYP_001191119 
Protein GI146303803 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.225567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAT CATACTTTGG AACGTATCAT CACACCACAT TTGAGGAATC CGAAAGAATG 
AGGGAAACGG CCAAGGAGAT GTTTATGGAG GCATTTAAGA GGATACTTGA TAGTAACGCG
GACCTACAGA TCATAGATGT AGGTTGCGGT TTAGGTTTCC TCACAATTCT CACCGCCTCT
TATTTCCCTA GGGCCACAAT AACCTGCGTG GACGTGTTTA CCCAATCATC TCTGAGGGAA
AACTCTAGGG ATATCCTGGA AAACAATCTC AGGATCGCTC AAGTCCTCGA TAGGGTGAAA
ATCGTTGAGG CAGACGTAAC CGAGATTCTC CCCCCAGGGA AATTCGACCT TGCAGTATCC
AATCTGGTGC TCCACAACCT AGGGAGAAAG AGATTCGTCG CTTACAGGAA TATTCATGAC
GTGCTTAAAC CTGGATCGTA CTTCGTAAAC GCCGACGGAT TCATAAAGAA AAGCCTGTTC
GTGGATCCCT TTCGCGATGA CATGAAAAGG ATTTCAGACA TATTTCACGT TGATTTTGTG
ATAAAACCAG AAACTCAAGG TTTATTCTTC AAATACATCT TGGTTGCACT AAAATCTAAA
TGA
 
Protein sequence
MDKSYFGTYH HTTFEESERM RETAKEMFME AFKRILDSNA DLQIIDVGCG LGFLTILTAS 
YFPRATITCV DVFTQSSLRE NSRDILENNL RIAQVLDRVK IVEADVTEIL PPGKFDLAVS
NLVLHNLGRK RFVAYRNIHD VLKPGSYFVN ADGFIKKSLF VDPFRDDMKR ISDIFHVDFV
IKPETQGLFF KYILVALKSK