Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1017 |
Symbol | |
ID | 5104320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 938769 |
End bp | 939185 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640506916 |
Product | UspA domain-containing protein |
Protein accession | YP_001191109 |
Protein GI | 146303793 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0550941 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTATAAAA AGCTTCTAGT TGGATATGAT GGATCGGAGC AAGCCAGGAA GGCGTTGCTC CACGCTATCC AACTGGCTAA GCTTCACTCC TCAAAGGTGG TTGCGGTCGA GGCAATAGAC TCTGATCACT TCGTGATCGA GGGCTATTAC AGGGAGGATC ACGTCAAGAT TAAGGAGAGG ATAATGGCCC ACACCGAGGA CATCAAGAGG ATATCTCACG AGCATGGAAT TGACGTGGAG TTCAAGGTGG CTAGGGGTCC ACCTGATCAG GTGATCTCGA AGTTCGCTGA GGAGGAAGAC GTTGACCTGA TAGTGTTAGG CACCAGGGGA TTTAAGGGAC TTAAGAAGGT TTTTCTCGGG AGCGTTAGCT CGTCGGTTGC CGAGAGGACC AAGAGGCCGG TCCTAGTCGT GAAGTGA
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Protein sequence | MYKKLLVGYD GSEQARKALL HAIQLAKLHS SKVVAVEAID SDHFVIEGYY REDHVKIKER IMAHTEDIKR ISHEHGIDVE FKVARGPPDQ VISKFAEEED VDLIVLGTRG FKGLKKVFLG SVSSSVAERT KRPVLVVK
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