| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1016 |
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| Symbol | |
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| ID | 5104319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 937070 |
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| End bp | 938323 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506915 |
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| Product | AAA family ATPase |
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| Protein accession | YP_001191108 |
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| Protein GI | 146303792 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0133655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATATTG AGGATATTAA GCAGGTCATA GTGGATCAGT CAGACATACT TCAAAATAAA
TTGAGAGGAA GGATAGTGAA GAGGGACGTC CCAGATCTAC TTAAGTACTT GAGGGCCCCA
AACGCCCTAG CCATCCTAGG AGTAAGGAGG GCTGGAAAAT CCACCCTGGC AACTCTTCTC
CTTCAGGGGA AAAAATTCGC GTATGTAAAC TTCGAAGATG AGAGATTGAA AGGTATCAGG
AAAGAGGAAC TGAATAAGGT TCTCCAGGGT ATTCATGAGC TGTACGGTGA CGTTGAATAC
ATCATCTTTG ACGAGATACA AGGAGTAGAG GGCTGGGAGC CCTTCGTTTC AAGGTTAAGG
GATGTGAAGA GGGTAATCGT CACTGGGACC AACTCCAAAC TTTTGTCCGG TGAGCTAGCT
ACATCCCTAA CGGGTAGACA CAGCGATTTC ATCCTCTTTC CCTTTTCCTT TCGCGAGTAC
CTGAGATATA AGGGCGAAGA GGTTGCAGAT AACGACTTTT ACTCCACGTT AAGGGTATCC
AGACTGAAGG TGGAACTTGA GAACTACATT GTGGAGGGAG GATTTCCGGA GTCCCTAATT
CTGAGCAGGG AACAGGTGAA CTTCATCTAT AATGACATAC TCTTCAAGGA CGTGATAGCG
AGATACAGGA TTAGGGAAAT AGGTAAGTTT AGGGAGTTTG CCAGGACACT AGTCTCCTAC
TACTCCAATG AGGTCTCGCT CTCCTCTTTA GCTAAAGTCC TGGGTCTGAA CAAGGTTACC
GTGGAGATGT GGGCTAATGG GTTGAGTGAG GCATACCTAA TCTTCTTTCT ACCAAGGTAC
GGCGAGAAGC TAAAGCAAAG GCTAACATAC AACAAGAAGG TTTACGTTGT AGATCCTGGA
ATAATTTCAA GCGTAGCCAT AAAAGGAAAG GACAAGGGTA GAATAATGGA GAACCTGGTG
GCTATCAAGC TCGTGAGAGA ACTTCAGGGT ACAGATCATT TATACTACGT TAGGAACGGT
TTCGAGGTCG ACTTTTACGA TGAGTTAAAC TCTCGACTGA TTCAGGTTAC CTATGCTAGC
GATGTAGTAG AGGAGAGGGA AATAAGGGGG TTAATCAGGG GTCACGAGCT AACAAGGGCC
AAGGAGCTAA TAGTTGTCAG CTGGGATTTA AGGGAGACAA TCAAGCATGA GGGCATGGAG
ATAAGGGTAA TCCCCTTGTA TCAGTTCTTG CTGAGAGACT ACAACACTCT GTGA
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| Protein sequence | MDIEDIKQVI VDQSDILQNK LRGRIVKRDV PDLLKYLRAP NALAILGVRR AGKSTLATLL
LQGKKFAYVN FEDERLKGIR KEELNKVLQG IHELYGDVEY IIFDEIQGVE GWEPFVSRLR
DVKRVIVTGT NSKLLSGELA TSLTGRHSDF ILFPFSFREY LRYKGEEVAD NDFYSTLRVS
RLKVELENYI VEGGFPESLI LSREQVNFIY NDILFKDVIA RYRIREIGKF REFARTLVSY
YSNEVSLSSL AKVLGLNKVT VEMWANGLSE AYLIFFLPRY GEKLKQRLTY NKKVYVVDPG
IISSVAIKGK DKGRIMENLV AIKLVRELQG TDHLYYVRNG FEVDFYDELN SRLIQVTYAS
DVVEEREIRG LIRGHELTRA KELIVVSWDL RETIKHEGME IRVIPLYQFL LRDYNTL
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