| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1015 |
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| Symbol | |
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| ID | 5104318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 935268 |
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| End bp | 936764 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640506914 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001191107 |
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| Protein GI | 146303791 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00519801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATTAGAG GCCCAATTTT ACCCGACCTC AGACCTAGAA CCCAGAGCGA TATCCTAGAG
TCCTCTGGGG AAGGCGTGGC CATAAACTTC CTTGGCAACA GGATAAGTTA CCCCGAGCTG
AGGGGAATGG TGGAGAGCGT TTCCTCCCAA CTGGAAATTG GCCGGGGAGA CGTGGTAATC
CTCTCCACCC AGAACATACC GCAGTTCGTC ATTGCCGAGT ACGCGGTGTG GAGGAAGGGA
GGGATTGTGT TGCCCGTTAA TCCCAGTTAC ACGCAAGCTG AACTGGACTA CTTGGCAAGG
GACTCTGGGG CGAAGCTCGT GATCGCGTCA TGTGAGTCCA ACGTTCCCTC GAACTTGCCT
GTGATCAGGA CCAATCCTCA CACCTTTCAC AAGGTGGAAG GGTGGAATAT CCCGGACTGC
GAAGAGGAAC TCAACCTCAA GTCGGGGAGA GGGGACAGGG TGAACTACTC CCCCCAAGAG
GTCGCGGTCC TGATGTACAC CTCGGGAACA ACGGGGAAGC CCAAGGGAGT TCCGATTACG
CACTCCAACC TTTACGCCTC CTCTCTCATC TACGTGAGGT GGTTCCAGTT CACGGGACGG
GACAAGGTCC TTGGGATCGC ACCATTCTTC CACGTGACTG GGCAGGTCTT CCACGTGACC
ACGCCCGTGA TGGCTGGGTC GCAGATAGTA GCAACTTTCA GGTTCGATCC CAGGTCAGCA
CTTAGGACAG TTCAAGAGGA GAGGACCACG GTAACCATGA GCGTTGCCAC AGCGTATAGG
GCCATGCTCA ACTCCTACTC TGGGGAAGAC CTAACGTCGA TGAGGTTATG GTCCTCTGGC
GGGATGCCAA TGCCTCGAGC CCTAGAGGAG GAGTGGAAAA GGTTGACAGG TTCCTGGATC
TATATGGCCT GGGGCCTCAC GGAGACCACA TCACCGGCCA CGCTGTGGCC TTACCCCTAC
TCAGGCGAGC TACCGGTTAA CGAAATGGGT GTAGTGAGCT CTGGGATGCC CGTGTACAAC
ACAGAGATCG AGTTGGAGGA CGGCGAGCTC CTGGTGAGGG GTCCTCAAGT CGTGAAGGGT
TACTGGAAAC AGGAGGAGTT CAAGGACGGA TGGCTTCACA CAGGGGACAT TGGCGAGATA
AGAGATGGTT GGGTTTACGT AATAGACAGG AAGAAGGATG TCATAGTTAC CTCGGGCTTC
AAGGTAATGC CGAGAGAGGT GGAGGAAGTT CTTCATCTTC ACCCTGGGGT TGACGAGGCA
GTTGTCGTGG GTATACCGGA CGAGTACAGG GGCGAGCGGG TAGTAGCCTT CGTGAAACCT
AGACCGGGAG CCAAACTGAA CCTCGAGGAA CTTAAAGAGT TCTGTAGGAC AAGGCTAGCC
CCATACAAGG TCCCCAGAGA GATCAGACTT GTGGACGAGA TTCCGAAGAC AGGTTCAGGC
AAGATTATGA GGAGAGCCTT CAAGGAGGAG AGGTCACCAA GTCATAGTAA CAGTTAA
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| Protein sequence | MIRGPILPDL RPRTQSDILE SSGEGVAINF LGNRISYPEL RGMVESVSSQ LEIGRGDVVI
LSTQNIPQFV IAEYAVWRKG GIVLPVNPSY TQAELDYLAR DSGAKLVIAS CESNVPSNLP
VIRTNPHTFH KVEGWNIPDC EEELNLKSGR GDRVNYSPQE VAVLMYTSGT TGKPKGVPIT
HSNLYASSLI YVRWFQFTGR DKVLGIAPFF HVTGQVFHVT TPVMAGSQIV ATFRFDPRSA
LRTVQEERTT VTMSVATAYR AMLNSYSGED LTSMRLWSSG GMPMPRALEE EWKRLTGSWI
YMAWGLTETT SPATLWPYPY SGELPVNEMG VVSSGMPVYN TEIELEDGEL LVRGPQVVKG
YWKQEEFKDG WLHTGDIGEI RDGWVYVIDR KKDVIVTSGF KVMPREVEEV LHLHPGVDEA
VVVGIPDEYR GERVVAFVKP RPGAKLNLEE LKEFCRTRLA PYKVPREIRL VDEIPKTGSG
KIMRRAFKEE RSPSHSNS
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