Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1013 |
Symbol | |
ID | 5105612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 933229 |
End bp | 934542 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640506912 |
Product | major facilitator transporter |
Protein accession | YP_001191105 |
Protein GI | 146303789 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00471133 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGATCCAA ATCTTCCCAG TAAGAACCTG GACAAATTCT CCTGGTCCAA GGTTCATACC TTCGCCTTCA TAGCTTTCTC TGCCGGATTT TTCCTAGAGG CTTACATTTT TGGTATGGCC TCCATAGCAA CTGGCTGGGT AAGCGTTCCT AAGTTCCTCA CGAGCACTCT CCTGGCATGG GCACCCCTCT GGCTAATCAT AGGGATTATG GTGACCGGTC CCCTTTCCGA TAGACTTGGC AGGAAGACCA TGTTCTACAT CACCATGGCC TTATATGGGG TTGGCGCAGT GGGACTGGTT TTCAGCGGGA CCTACTATCT AATCCTTCTT TTCCTTGCCA TGATGCTCTT CGCCGCTGGG GGTGAGATGA ACACAATCAT GGTCGCGACC CACGAGATAA TGCCCAGGAA ACACAGGAGC AAGGCCTTCT TCCTGGAGCT CAACTTCATT AACGTTGGAG GTTTCGTACT AGGTCTCGTG GGTTACCTGG TTCAGAACCA ATCGGTGTTT TTCCAGAGAC TCATGATAGG TGTCACAGTC CTCATAGTCC TCGTGGTTCT GATGTACACC AGGCTCAAGA TTCCCGAGTC CATACGGTGG CTCGAGAAAC AGGGTAGACT TGAAGACGCG GACAAGGAAA TCAAGAAGTA CTTCGGAGAT ATAAAGATAA TATCGCAGGA TGAATTGAGG CCAAAGATCA CGGTTAAGAA GCTTCCCATG TGGTTTAAGC TCCTGGTCGT AATCCTGGTT GCGGCTGCCA ACACCATCGG TTACGGTCTC ATGACCTACG TCCTGGGGCC CTACTACTTT CCGAGTCAGA CTGCCATGAT CATACTAGTG ACCAACCTAG CTGAGATGCT TGTGGGACTG GTGATAGGCG TGTTCGCTGA CTCCCTGAGC AGGAAACTAC TCCTCCTCAT CTCCTTTGTG GGGGCGACGG GATTCACGTT TCTGATCATG GGGACAATAC CCATGTGGAG CAAGAGTCTG ACCCTATTCT ACTCTCTACT GGTGTTGCTA AACGTGTTCG TAGGGATCTC CTATCTTACG GAAGATGCCC TCAAGAGCGA GATCTGGCCT ACCCTCAAGA GGGGTACAAT AACGGCGGTG GCAAGGTTCA TATCCATTGG AGCTTACATT CCCACGATTT ACCTTACAAG TAACTTCAGC ATTTTCCAGT ACACTCTGTT CAACGGGCTA GTATGGGCAG TGGGTATGGT AGCAGCCATA TTATGGTTCG TGAAGGGGTA TGAGACCGGT AAGGGAATCA GTGTCGATGA AATTTCGGAG GAAGTAGAAG GAACGAAGGT GTGA
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Protein sequence | MDPNLPSKNL DKFSWSKVHT FAFIAFSAGF FLEAYIFGMA SIATGWVSVP KFLTSTLLAW APLWLIIGIM VTGPLSDRLG RKTMFYITMA LYGVGAVGLV FSGTYYLILL FLAMMLFAAG GEMNTIMVAT HEIMPRKHRS KAFFLELNFI NVGGFVLGLV GYLVQNQSVF FQRLMIGVTV LIVLVVLMYT RLKIPESIRW LEKQGRLEDA DKEIKKYFGD IKIISQDELR PKITVKKLPM WFKLLVVILV AAANTIGYGL MTYVLGPYYF PSQTAMIILV TNLAEMLVGL VIGVFADSLS RKLLLLISFV GATGFTFLIM GTIPMWSKSL TLFYSLLVLL NVFVGISYLT EDALKSEIWP TLKRGTITAV ARFISIGAYI PTIYLTSNFS IFQYTLFNGL VWAVGMVAAI LWFVKGYETG KGISVDEISE EVEGTKV
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