| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1012 |
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| Symbol | |
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| ID | 5105611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 932156 |
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| End bp | 933088 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640506911 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_001191104 |
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| Protein GI | 146303788 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0501] Zn-dependent protease with chaperone function |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00402297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCGTTA AGGGAAGGCT CCTCACTAGC ATGGGGTTTG CACTAATCCT CACCGTGGTG
TCAGAGGCCC TCATCCTTCT GGTTATATCC TCAGCCCTCA GGATCTCGCT CGTCTTAGTT
TTCCCTCTAC TCTTCGTGTT CTGGTTATTT CAATGGCTAA TCTCACCTTA CCTTGTGGGA
AGGGGAGGAA TAGAGATTCA TTCAAGCGAC CCAGAGTATG GCTGGTTAGT ACAGATGGTG
AGGGAGGTGG CGCTCGCGTC GAGGATATCC CCACCTAGGG TTTTCCTCGT GGATGCTCCC
TATCCCAACG CCTTCGCCTA TGGAAATAGC GTAAGCGGGA AAAGGGTGGG AATAACCATA
CCTCTCCTTC AGATCTTAGA CGTGAATGAA CTCAGGGCTG TAATAGCCCA TGAGGTGGGT
CACCTGAAAC ATAGGGACGT GGAAATTGGG ATGACCCTAG GCTTGATACC TACTGCCCTG
GGTTACATTA GCACCCTCCT CATGAACTTC GGGTTTTTCG CAATACTCTT AGCAGGAGAC
GAATTTGAGC TTCTATTTGC CCTACTTGCC TTGGCCCTTG GTTTTATCCT TCTAGTTGCC
ACGTTAACTC TTCAGGTCTT TGTCCTATGG TTCAATAGGC TGAGGGAATC CTATGCCGAC
TACAACTCGT ATGAGGTCCT AGGTGAGGGA TCGAGCGCCC TTGCCACTGC TCTGGCAAAG
ATAGAGCTAT ACATGCAGAA AATTAGACTG GACCCCTTCA CTGGGATCAT TGTGACGGCA
GCCCCGGTCA GGGTCGAGAG CCAGGAACCT CTCCTCGTTG TGAGGGAGTG GCTCAACAAG
AAGGTGAGCG TCTTCACGGA CATACTTTCC ACACATCCAC ATCCGGCCAG GAGAGTCCAG
ATGCTGTATA GGCTAATCAG GGAAGGCGGT TAA
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| Protein sequence | MSVKGRLLTS MGFALILTVV SEALILLVIS SALRISLVLV FPLLFVFWLF QWLISPYLVG
RGGIEIHSSD PEYGWLVQMV REVALASRIS PPRVFLVDAP YPNAFAYGNS VSGKRVGITI
PLLQILDVNE LRAVIAHEVG HLKHRDVEIG MTLGLIPTAL GYISTLLMNF GFFAILLAGD
EFELLFALLA LALGFILLVA TLTLQVFVLW FNRLRESYAD YNSYEVLGEG SSALATALAK
IELYMQKIRL DPFTGIIVTA APVRVESQEP LLVVREWLNK KVSVFTDILS THPHPARRVQ
MLYRLIREGG
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