| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0998 |
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| Symbol | |
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| ID | 5104547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 921205 |
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| End bp | 921468 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640506897 |
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| Product | HEPN domain-containing protein |
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| Protein accession | YP_001191090 |
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| Protein GI | 146303774 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0345509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0093347 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGGGA TCAGGATTCA ACTGCTTAAG GCGAGGGCTT TACAGTTTCT TGAAAATGCT
AGACTTAACG TGGAAAAGGG ATATTATGAT TTGGCCGTGT TTAACTGTGA ACAATCACTT
CAACTCTATC TAAAGGCGAT ATTACAGGAA CCCTTTGCGT CCGAATTCAG ATCTCATGAG
CTTAAATCAC TCCTGTCTCA TCTCTCTAAG CTGTTGGGAG AGCGAGTTTC AGGAGGCACA
GAGGGAAATA GATGCGTTGA CTAG
|
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| Protein sequence | MSGIRIQLLK ARALQFLENA RLNVEKGYYD LAVFNCEQSL QLYLKAILQE PFASEFRSHE
LKSLLSHLSK LLGERVSGGT EGNRCVD
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