| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0995 |
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| Symbol | |
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| ID | 5104544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 918319 |
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| End bp | 919245 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640506894 |
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| Product | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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| Protein accession | YP_001191087 |
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| Protein GI | 146303771 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02295] 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0341301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0115779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTAACT TAAACGTGCT CAGGCTTTCT CACGTGTGCG TGAGAGTAAC AGACCTAGAG
AGGGCTGAGA ACTTCTATGT CAATCTCCTT GGCTTCGTGG AGACGCAGAA GGATGGAGAC
TACCTCTATC TCAGGGGGAT CGAGGAGGGA CAACACCACA GTCTAGTTCT GAAGAAGGCA
AGCTCTCCAG GCCTGTGCTA TATTGCGTTC AGGGTTAGGG AGGGACTCGA TAAGGTGAGG
GAACTGGGTA ACTCCACGAG ATTCAAGGAG AAGGGGGTGG AGGACTCCAT ACTTGTGGAG
TCGCCTGGAG GAGTTCCCCT CCTCTTCTAT CAGGACATGG AGTATGTGGG TGATTTGAGG
CTGAAGTTCT ATCTTCATCG AGGCGTATCC CCGGTGAAGT TAGCCCACGT GAATTACGTG
GTAGGTAACC TTGAGAGGGA GGAGAGATTT TTCAAGGACC TCGGGTTCGT GGAAACCGAA
CGTTTCCTGG ACAAGACAGG GAGGAAAACA GTGGTCTGGC TCACAAGGAG GGGTAACTCC
CACGAAGTGG CAATAGCTGA GTCCCAGAGG AAAGTTCCAG GCTTCCATCA CGAGACCTTC
TACGTACATG ACGTAAGGGA CGTGATTAGG GCAGCGGATT TGCTTGCATC CATGGGGTAT
TGGGACAACA TAGAAAGGGG CCCGGGAAGG CATGGGGCCA CAGAGGGGTA CTACATCTAT
CTCAGGGACC TGGACATGAA TAGGCTGGAG TTCTTTACTA ACGATTATGA GGTGTTAGAC
CCAGATAAGT GGAAGACAGT GGAATGGACC CACGATCAGT TTAGGTTTAG GAGCGATTTC
TGGGGAAGAC CAATCCCAGA TTCCTGGCTC AAGGAGTGGA TGCCCGTGGA GAACCTTCAC
GGAGAGTTAA GGGGGTGGGA AGCATGA
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| Protein sequence | MTNLNVLRLS HVCVRVTDLE RAENFYVNLL GFVETQKDGD YLYLRGIEEG QHHSLVLKKA
SSPGLCYIAF RVREGLDKVR ELGNSTRFKE KGVEDSILVE SPGGVPLLFY QDMEYVGDLR
LKFYLHRGVS PVKLAHVNYV VGNLEREERF FKDLGFVETE RFLDKTGRKT VVWLTRRGNS
HEVAIAESQR KVPGFHHETF YVHDVRDVIR AADLLASMGY WDNIERGPGR HGATEGYYIY
LRDLDMNRLE FFTNDYEVLD PDKWKTVEWT HDQFRFRSDF WGRPIPDSWL KEWMPVENLH
GELRGWEA
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