| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0980 |
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| Symbol | |
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| ID | 5104530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 905146 |
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| End bp | 905787 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640506880 |
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| Product | thymidylate kinase / thymidylate synthase |
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| Protein accession | YP_001191073 |
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| Protein GI | 146303757 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.653916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0681105 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAGGCT CAATAATCGC GTTTGAGGGA ATAGATGGGT CAGGGAAATC TAGTCAGGCT
AAGCTTCTCA AGGACTGGCT CGACTCTAGG GTTGACGCAT ACCTCACCGA GTGGAACTCA
AGTGACTGGA TTCATGAGGT AATAAAGGAG GCAAAGAAAA AGAACCTGCT CACTCCGCTG
ACGTTTAGCT TAATACACGC CACCGACTTC GCGGATAGGT ATGAAAGGCT AATCCTGCCC
ATGTATCGCA CAGGCTTCGT TGTTGTGTCT GACAGATACT ACTACACGGC CTATGCGAGG
GACTCGGTCA GGGGAGTCAG CCTTGAATGG GTAAAGAAGC TCTACTCCTA CGCTCCGAAA
CCGGACATAA CCTTTTTCAT CAGGGTAACA CCAGAGGTGG CCCTTTCCCG CCTCAAGGAG
AGCAAGAGGG GGATCAAACC GCAGGAGGCA GGGGCAGACG TTTTTCCTGA CCTGGAACCG
GAGGAAGGCT TCCTCAAGTA TCAGGGGATG ATCCTTGAGA TATACGACAA ACTAGCTGAA
GAGGAAGGTT TTGTGGTTCT CGACGGAAAT AGATCCCCCA GGGAGATCCA GATGGACATT
AGGAGGAGAG TGGGTGAATT ATTATGGAAG GAAAGATCAT AG
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| Protein sequence | MGGSIIAFEG IDGSGKSSQA KLLKDWLDSR VDAYLTEWNS SDWIHEVIKE AKKKNLLTPL
TFSLIHATDF ADRYERLILP MYRTGFVVVS DRYYYTAYAR DSVRGVSLEW VKKLYSYAPK
PDITFFIRVT PEVALSRLKE SKRGIKPQEA GADVFPDLEP EEGFLKYQGM ILEIYDKLAE
EEGFVVLDGN RSPREIQMDI RRRVGELLWK ERS
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