| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0977 |
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| Symbol | |
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| ID | 5104527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 903078 |
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| End bp | 903893 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640506877 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_001191070 |
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| Protein GI | 146303754 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0669061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACTC TCAGTGTGCT CGGCGCGGGA ACCATTGGAT CACTTCTGGT GAAGGCAGGC
CTATCTCAGG GTTATAGGGT AGTCGCCACG GGCCGTTCCG AGAGAACTCT ACTAAGGGTG
AAGGGACTGG GAGCAGAGGC CATCACTGAC AACGCTAGCG CCGTGATGAG GAGTGACTTG
GTTATGATCA GTGTGAAGCC CCAACATTTT CCTGAGCTAG CCAAGTCAAT TCCAAGGGAG
CTCTGGAGAG GTAAAACCGT GATCTCGGTC ATGGCTGGAG TTAGGCTCGA CACCTTGCGT
AAGGTGATGG GTGGGGCGCA GGTGTTCAGG GCAATGCCCA ACGTCAATGC AGTGGTTAAC
ATGTCAACCA CCGCGATCAC CGGGGAGGGT GAGGCCAAGG AACTGGTGGA TTCACTCTTC
AGGTCCTTGG GGGTGACCTA TTGGGTCAGC GAGGACATGA TGGACGTGTG GACTGCCCTC
ATAGGGAGTG GACCTGCTTT CATCTCTGAA ATTGTGGATG GGCTAGTGCT GGGCGCTGTA
TCCTCGGGTA TGCCCAGGGA TCTAGCTTAC TCCTCAGTTC TAGACATGTT AAAGGGAACT
GCCGAGAACC TCAAGAATCA CAAGGGTCAC CCCGTGGAAG TCAGGGATAA CGTGACAACT
CCCGCTGGAA CAACAATCAG GGGACTCAAG GCCATGGAAG AGAGAGGAGT TAAGGCAGCG
CTCATAGAGA CGGTAGAAAG CTCGAGCAGG AGAGCATCAG AGCTTGGTAA GCTAATTGAC
GAAAGAATTA GGAGGGAGTT AATTGGAGAG GATTAA
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| Protein sequence | METLSVLGAG TIGSLLVKAG LSQGYRVVAT GRSERTLLRV KGLGAEAITD NASAVMRSDL
VMISVKPQHF PELAKSIPRE LWRGKTVISV MAGVRLDTLR KVMGGAQVFR AMPNVNAVVN
MSTTAITGEG EAKELVDSLF RSLGVTYWVS EDMMDVWTAL IGSGPAFISE IVDGLVLGAV
SSGMPRDLAY SSVLDMLKGT AENLKNHKGH PVEVRDNVTT PAGTTIRGLK AMEERGVKAA
LIETVESSSR RASELGKLID ERIRRELIGE D
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