| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0935 |
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| Symbol | |
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| ID | 5104365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 862426 |
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| End bp | 863967 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640506838 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001191031 |
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| Protein GI | 146303715 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTTC AGTGGCTGAA AAGGGAAGTG CTTCACTTTC TGGATCTCGT CCCTATGTCT
ACCTCCAGCG TCGCCCCCGC ATTTAGTATT GCAGCGGCCT ATGGAAGCAT GGTGGCGTTA
GTGGGTCCCC AGGCCATAAT GTCCGTGGTT ATTTCCTTTC CGTTTTTCCT TATGGCGTCT
CTCATTTTCA GGAAGCTGAA TAGGGTAGCT CCTCACTGTG GAGCCTCATA TCATTGGGGA
AGCAAGTTCA TGGGAAAAAG GTATGGCGGG TTTCAGTTCT GGATCATAAC TCTGGCATAT
TTCTTGTCCC TACCACCAAT CATTATACCT GCGGGGGAAT ACACTTTGGA TTTACTGTAT
AGGCTAGGTT TAATTGCAAG GTCACTGGAA ATGAGCGTGT TCTGGGACTC GATAGTCGGA
ATGATTTGGG CAATCTTGGC AGCAATTCCC CTGGTCCTAG GAGTTAAACC TACAGCTAGA
ACCACCGAGG CTTTCTTGCT TATCGAATTA ATAGTTATGG TGAGCTTCAT AGTGATAGGG
CTCATTTCTC TCCCTTTTCA TACGGTGAAT AAAATAAATC TCTCATGGTT CTTTAGTGCT
AAGGATTTGA CTTCCTTACC ACTCTTCTTA GGCCTAGCTG CAAGTATGGT CATTGTGGCA
ACGATTCTAG ATGGTTGGGA GATAGACAGT TACGCATCGG AAGAATCTAA GAGGCCAACT
AGCTGGCCAG GTAGTGCTGG CGTGATAGGA TTGATCTCAG TATTCCTCAT CTACATGGTA
GTGATGCCTC TCATGACCAT AGAAACTCCA CTATCTGCAA TATCATCGTC AGTAGATCCA
TTGGCTCGTT GGGCCTCATA TGTGATTCCC AACTATGCGT GGGCAATGGA CATCGCAATA
ATTTGCTCCA CCGCGAGCTC CCTCTGGCTT ACTGCCTTCA TCTTGAGTAG AGTTTGGTAT
TCAGCCTCCA GGGAGGGATT ATTACCCTAT ATCTTTGGAA GGCTAAACAA ATATGGAAGT
CCGTGGGTGG CAGTGGTGGT GATGACGTCT CTCGAGATCT TAGTCCAAGG AGTGGAGCTA
GGGCTCCCTT CCGTCGATAG TTTGTTCGGA ATCGTGCTCA CGGGTGCAGG GGCGTTTCTC
CTCCTTGAGT TTGCTATGGA TTCAATTACA GTCTCTAAAA TAGCATGGGA AGGGAGAATA
GAGTGGTATT ATAGAATACT AGCTCCAGTC GCAGCAGGAG GAATGCTCTT TATTGTTATT
ATGGGGATAA TTGATGCTGG TCCTGCATTT GGAATTCCTG CCGACATCTA TGCTTTAACT
ATCTCAGTTT TAATTGTGAT TGGTGGAATT TATTTTTCTC GTAGAGGCAA TAGGGTCAAT
ACCGTGGTTG CTCCTTGGCT AATGAGAGAG GAAAGACAAG GAAGACTACG TGAAAATGAT
TACATCGATC CACATCTGTC ATGCTATTCT CCTCTATTCT TACTGATATA TTTTCTCAGG
ATTAAAGCAG AAAACAAGGC TAACAATACA AAAGTTACAT AA
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| Protein sequence | MNVQWLKREV LHFLDLVPMS TSSVAPAFSI AAAYGSMVAL VGPQAIMSVV ISFPFFLMAS
LIFRKLNRVA PHCGASYHWG SKFMGKRYGG FQFWIITLAY FLSLPPIIIP AGEYTLDLLY
RLGLIARSLE MSVFWDSIVG MIWAILAAIP LVLGVKPTAR TTEAFLLIEL IVMVSFIVIG
LISLPFHTVN KINLSWFFSA KDLTSLPLFL GLAASMVIVA TILDGWEIDS YASEESKRPT
SWPGSAGVIG LISVFLIYMV VMPLMTIETP LSAISSSVDP LARWASYVIP NYAWAMDIAI
ICSTASSLWL TAFILSRVWY SASREGLLPY IFGRLNKYGS PWVAVVVMTS LEILVQGVEL
GLPSVDSLFG IVLTGAGAFL LLEFAMDSIT VSKIAWEGRI EWYYRILAPV AAGGMLFIVI
MGIIDAGPAF GIPADIYALT ISVLIVIGGI YFSRRGNRVN TVVAPWLMRE ERQGRLREND
YIDPHLSCYS PLFLLIYFLR IKAENKANNT KVT
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