| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0907 |
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| Symbol | |
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| ID | 5103553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 838802 |
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| End bp | 840235 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640506810 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001191003 |
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| Protein GI | 146303687 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0239598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGGA AAGCTCGGGA GACCTTAATT ATTCTAATAT CCGTGTCGCT TCTCATTAAC
TACGTTGAGA CCATGGTAGT CCCGGCCGTC CCCAAAATTC AACAGGACTT TGCGACCACA
GAGACCCTGG TAGCCTGGGT AACCTCGGCA TTTACCATCG TGGGGGCAGT GGTCTCGCCG
GTTTTCGGTA AGCTCGGAGA TCTTTACGGG AAGAGGAGAG TTTATCTCCT TTCCATGGTT
TTCTATACCT TCGCGGTGGT AATGGCTGGT TTCTCCCCAA ACATTTACTT TCTGATTGCG
GCTAGGGCTA TCCAGGGACT TGGTTTCGCC ATGTTTCCGC TGAGCTTGGC AATAATCACG
GACATTCTCC CGCCTGAGAT GATAGCAACG GCACAGGGTA TCATAAGTGG AACCATGGGG
ATAGGGACTG CGCTCGGACT AGTCGTGGGT GCCTTCATTG ATCAGGATCT AGGCTGGCAG
TACGCCTTTC ACATCGCGTT CGTGATTTCC CTCATCCTCC TATTCGCTGC GGTGAAGTTA
GTTCCAGAGA CGGGGGTTAG AAAGAAGGCG ATGATAGATT ACGTGGGGTT TGGGACCCTC
ACTGCCGGTG TCACGCTGAT CCTGATTTAC CTAACCCAGG AGTCAAGTTG GGGATGGTTT
TCCCCGCAGT CATTGTCGCT CTTGATCCCT GGTATGGTTT TCCTTGGCTT CTTTGGATGG
TATGAGCAGA GAGTTAAGAA TCCCGTAATA GAGCTTAGGC TCCTTAAGAT CAGGAACGTT
ATGGTGGCCA ACATCGCGGG CCTTATCTCC GGGATTATGA TCCTGGCCCT GTTTTACGGG
ATAATATACT ACACCCAACT GCCTCACCCC TTTGGCCTCG GCCTCGACAT AATCTCAGCC
GGGTTGACCC TGGCTCCCTC TACCCTTGTG ATGTTCGTGG TGGGTCCAAT TCTAGGAAGA
ATGATAAATA GGGTTGGGCC GAAACCCATC ATTGCCGTGG GTTCCCTGGT CATGATGCTA
GGTTTCTATC TCTTAATAGT AAATAGGGCA ACTCCCCTAG ACGTTACCAT GGACACTGTG
GTGGGCATGC TAGGCCTTCT CTGCCTCATG ATTCCCATAG TGAACATGAT ATCCGTGTCT
CTACCTCCCG AGGATAGGGG AGTGGGCATA GGGATGAACA CGTTGATTAG GAACATAGGT
AGCGCTGTTG GGCCAGTGAT CACGACCTCC ATAATGTCGA GCTATCAGGG GGCCTTTGTT
CTTCCCTTCG ACGGGACTTA CATGGTTGAG ATACTCCCAA GTTCAACGGC TTTCGACCTC
ATATTTACCG TGGGAATAGG GATGGCAATC CTGAACCTGT TAATATCTTT GACCGTTAAG
AACTATAGGT TCCAGGCTAA GCCAACAAAG GAGGTGGTAG TTGAGGCCAA GTGA
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| Protein sequence | MDRKARETLI ILISVSLLIN YVETMVVPAV PKIQQDFATT ETLVAWVTSA FTIVGAVVSP
VFGKLGDLYG KRRVYLLSMV FYTFAVVMAG FSPNIYFLIA ARAIQGLGFA MFPLSLAIIT
DILPPEMIAT AQGIISGTMG IGTALGLVVG AFIDQDLGWQ YAFHIAFVIS LILLFAAVKL
VPETGVRKKA MIDYVGFGTL TAGVTLILIY LTQESSWGWF SPQSLSLLIP GMVFLGFFGW
YEQRVKNPVI ELRLLKIRNV MVANIAGLIS GIMILALFYG IIYYTQLPHP FGLGLDIISA
GLTLAPSTLV MFVVGPILGR MINRVGPKPI IAVGSLVMML GFYLLIVNRA TPLDVTMDTV
VGMLGLLCLM IPIVNMISVS LPPEDRGVGI GMNTLIRNIG SAVGPVITTS IMSSYQGAFV
LPFDGTYMVE ILPSSTAFDL IFTVGIGMAI LNLLISLTVK NYRFQAKPTK EVVVEAK
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