| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0891 |
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| Symbol | |
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| ID | 5103537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 825943 |
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| End bp | 827355 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506794 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001190987 |
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| Protein GI | 146303671 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGAA CAGTAATCCT TCTAGTACTT GTCCTTGGGA CGTTAATGGC CGCGGTTGAC
GGAACCATTG TTCTCTTGGC CTTGCCTCAA ATTGCTCAGG ATTTACACGC AGATCTCTTT
ACGGCAATTT GGGTTCTCTT GGCTTACCTG CTGGTAACGG CCATACTCAC AACTCAGACT
GGAAGAATAG GGGATATTTA CGGGAGGGCC AAGATCTTTA ACCTGGGTTT CGTAATTTTC
ACCGTTGCCT CAGCGTTATG TGGATTGTCA AACTCCATTT ATCTGTTAAT TGCATTTAGA
CTAATTCAGG GGGTTGGAGG GGCGATGATG ACTGCAAACA GCGGGGCAAT AGTTGCAGAT
CACTTTCCCC CTAACATGAT GGGGAGGGCT TACGGTTACA CTTCACTGGG TTGGAACATA
GGAGCCCTTC TAGGAATAGT CTTGGGAGGA ACCTTGACCA CTTTCTTTGG ATGGCCTTAC
ATCTTTTACA TTAATGTCCC CATAGGGGTT GTAGCAACTA TCCTTGGTGT GAAGTACATT
AAGGACGTCA ACAAGGTGAA AAGGGAACTT GACGTCACGG GAGCAGTACT CCTTGGAGTT
GCACTGGTTC TCGTTTCCTA TTCTTCCATT GTAATGGCGA GCGTCGGGGT TGATTCCCTG
AATCTGGGAA TACTGGTCGT GGGGATAATA CTCGTTGGGG CCTTCATCTT TAACGAGAGT
AGGGCGAAGA GTCCCGTGAT AGACCTAAAG ATGTTTAGGT ACAGGCTCCT GGGTTACTCC
TTGACCGCTA CCTTCCTGCA GGCAATAGGG GGACTAGCCA TCACCTTTCT CCTCATCATG
TACCTTCAGG GCGTAAGGGG GCTATCTCCC CTAGATGCGT CCCTGTTACT TCTTCCAGGT
TATGTTGTGG CCAGCTTCCT AGCACCCTAC ATGGGTAAGT TAACCGATAG GTATGGTTCC
AGATGGTTTG CCACCGGAGG GATAGCCATC ATCATGCTGT CTGTGATAAT GTTCTATTTC
GTGCTAACGC CGGAAACTCC TTACACATGG ATACTGCTAA TTTCTGGGAT TAATGGTGTG
GGTTCAGGGA TGTTCTGGCC ATCTAACACC AGTGCCATAA TGTCAAGTGC TCCCAAGGGA
TACTTTGGTT CAGTCTCAGG TCTCTCGAGG ACCCTTGGAA ACGTGGGAAT AATTCTGAGC
TACGTGATAA CACTTTCGGT GGCAGCGGCT GCAATTCCTA AGGAGGTGGC CTTTAAGATA
TTCTTGGGAA CCTCCAAGTT AGATGGTGGG CTCTCCTCTA TTTTCGTGGT AGGGCTTCAT
TACGCCTTCT TGATCTCGGC AGTGGTGCTG GCTGTGGCCA CGTTCTTCTC CTTCCTTAGG
GGGAAAGAGA TACGTATGGA GGAGAAAGCC TAG
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| Protein sequence | MNRTVILLVL VLGTLMAAVD GTIVLLALPQ IAQDLHADLF TAIWVLLAYL LVTAILTTQT
GRIGDIYGRA KIFNLGFVIF TVASALCGLS NSIYLLIAFR LIQGVGGAMM TANSGAIVAD
HFPPNMMGRA YGYTSLGWNI GALLGIVLGG TLTTFFGWPY IFYINVPIGV VATILGVKYI
KDVNKVKREL DVTGAVLLGV ALVLVSYSSI VMASVGVDSL NLGILVVGII LVGAFIFNES
RAKSPVIDLK MFRYRLLGYS LTATFLQAIG GLAITFLLIM YLQGVRGLSP LDASLLLLPG
YVVASFLAPY MGKLTDRYGS RWFATGGIAI IMLSVIMFYF VLTPETPYTW ILLISGINGV
GSGMFWPSNT SAIMSSAPKG YFGSVSGLSR TLGNVGIILS YVITLSVAAA AIPKEVAFKI
FLGTSKLDGG LSSIFVVGLH YAFLISAVVL AVATFFSFLR GKEIRMEEKA
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