| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0889 |
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| Symbol | |
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| ID | 5103535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 823184 |
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| End bp | 824587 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640506792 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001190985 |
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| Protein GI | 146303669 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGCCT TTTCCTTGGG CAATATCATA GGATCGGGAA TTCTGCTCCT GCCCGCTGTA
ACCGCATCAA TGGCAGGTGG TCTAACTCCA CTTGTGTGGT TAGCTGGAGG AATAATGTTA
CTTCCCTTAG TTTTTGTGTA CTCTCAGCTT GCGAAAATGT ATCCGGTAGT GGGTAGTAAG
GTAAGATTCG TTAATGTAAC CCACGGCAAA GTTCTTGCCT CTTCCGTAGG ATGGCTCTAT
CTCATAGGAA CGTTGTTTGT GGTACCGATT GAGGCTGAGG CTTCCCTACA GTACCTTTCC
TACATCTTTC CATCTTTATG GAGTAACGGT TCCCCAACCT TAGCGGGTGA TCTCGTCGAA
ATAGGCATTG TTTCCGCAAT TTACTTCCTA GTTTACATGG GAATTAGAAC TCAGTCCCTA
AGTGTGAATG TTATAACTTA CACCAAGCTT GGGATATTGG CACTTTACGT AGCTCTTGTG
GGGATTCTCG CGTTTCATCC TTCAAACTTT ACCATTCCAA CCCAATCGGG CACATCAACC
TTCCTAGATG CCATAGCGTT AACGATGTTC GCGTACGGAG GATTTAGAAG CGCTATGGTA
TATGCTGGTG AAAGCAAAAA CAAGAACCAG ACCGGAAAAG CCATACTGAT TGCCTTCCTG
CTTTCCATGA TTGTCTACAC CCTTGTTCCC ATAGTTTTCA TAGGTTCCCT CACGCCTGAA
ATTCTAGGTC ACGGATGGGG ATACGTTTCA AAGATGAGTG CGCCTTTAAC TCAAAGCGCT
TTAATAGCCG GTATACCAGT GCTTGGAGCA CTCTTCATCA TAGATGGTGT AATCTCGCCC
TCCGGTGCAT CTTTAATTGG CGCTGGAGAC ATCAGCAGGT ACATGTATGC TCTGGTCAAG
GTGGGCAGTG CTCCCAAGGG ACTGGGAAAG GTAAGCGAAA AGCGTGGAAT TCCTGTTATT
CCAACGTTAC TCTCCCTCTT AGCTTCGATA GTGCTGTTAT TTGTTTCTCC TACGTTTGAG
CAGTCAATTG GCTACCTCAT TGCAGCTCAT GTGCTGGGTT ACGCAACAGG GCCTATTAGC
CTGTATGTTC TCACTTCCAA CAGAGGATAT AAGGCCATTT CCATGGTTGG ATTTATAACA
TCTGGCCTCA TATATACTTG GCTGGGATTC CCTAAGACTC TATTTGGCAC CCTGATCATA
GGGGTATCCA TGCTAGTAAT GGCCATGATA AACAGACCCG TGAAACCAGC ATTATGGTAC
GTGGGATATG CTATGGTATT AACAACTATA AGTGTTCTGG TTTCTAACAC CATTTATGAG
ATTATTGCAA CTTTAGCTCT GGCACCCGTA TTCTTTGCTC TAGCCATAAA ATCGGCTAAG
GGATCTGGAG AAGTAGAAGC CTAG
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| Protein sequence | MIAFSLGNII GSGILLLPAV TASMAGGLTP LVWLAGGIML LPLVFVYSQL AKMYPVVGSK
VRFVNVTHGK VLASSVGWLY LIGTLFVVPI EAEASLQYLS YIFPSLWSNG SPTLAGDLVE
IGIVSAIYFL VYMGIRTQSL SVNVITYTKL GILALYVALV GILAFHPSNF TIPTQSGTST
FLDAIALTMF AYGGFRSAMV YAGESKNKNQ TGKAILIAFL LSMIVYTLVP IVFIGSLTPE
ILGHGWGYVS KMSAPLTQSA LIAGIPVLGA LFIIDGVISP SGASLIGAGD ISRYMYALVK
VGSAPKGLGK VSEKRGIPVI PTLLSLLASI VLLFVSPTFE QSIGYLIAAH VLGYATGPIS
LYVLTSNRGY KAISMVGFIT SGLIYTWLGF PKTLFGTLII GVSMLVMAMI NRPVKPALWY
VGYAMVLTTI SVLVSNTIYE IIATLALAPV FFALAIKSAK GSGEVEA
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