| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0885 |
|---|
| Symbol | |
|---|
| ID | 5103531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 819699 |
|---|
| End bp | 820298 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640506788 |
|---|
| Product | urease accessory protein UreF |
|---|
| Protein accession | YP_001190981 |
|---|
| Protein GI | 146303665 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0830] Urease accessory protein UreF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCGATCC CGATCATTAG GGCCTTTCAC CTTTTCGACG GTTCACTTCC TCTAGGTGGT
TTCAATTACT CCTTCGGGGT TGAGGAAGCC TATTACGAGG GAATCGACGT GGAGGGCTTC
ATTGTCACAA CTTTCAGGAA TGTGATTGAG AAGGGAGACA TCCCAGTGGC TAGGATTGCC
TTCACTGATC CGTGGAAGGC CAACGATATC TCTATTGCAT CCAAGCTTAC CAGGGAGTTG
AGAGAGGCAT CAATAAACAT GGGCAAGTCC CTAGCCATGT TGGGACTTTG TAATGACGAT
TTTGTTAATG AAGTTAGAAG AGGTCTAAGG GGAAGCTATC CTGTGGTGAT AGCTAGGTGT
TGCGTCGCGA TGAAGATAGA TCAAGTAGCC TGTCTGGCAG GGCTAGCGTA TTCTGAGTTA
GCACAAATGG TGTACTCGGC GGTCAGATTG GGAGCGCTAA ACTTCATACA GGGACAGAAA
CTGATTACGC GGGTACTGGA GACTGTATCA TTACAGGAGG AGTTCGAGCC ATTCTCCCCT
TTACTTGACG TGTTGTCTAA GAAACATGAG GAAAGGGAGC CAAAGGTGTT CATGTCATGA
|
|---|
| Protein sequence | MSIPIIRAFH LFDGSLPLGG FNYSFGVEEA YYEGIDVEGF IVTTFRNVIE KGDIPVARIA
FTDPWKANDI SIASKLTREL REASINMGKS LAMLGLCNDD FVNEVRRGLR GSYPVVIARC
CVAMKIDQVA CLAGLAYSEL AQMVYSAVRL GALNFIQGQK LITRVLETVS LQEEFEPFSP
LLDVLSKKHE EREPKVFMS
|
|---|
| |