| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0868 |
|---|
| Symbol | |
|---|
| ID | 5105227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 801099 |
|---|
| End bp | 801494 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640506772 |
|---|
| Product | PadR family transcriptional regulator |
|---|
| Protein accession | YP_001190965 |
|---|
| Protein GI | 146303649 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.343891 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGCC AATGGCAAAG GAAGAGAGGG CTCGCAAACC TGATTCTAAC GCTTCTGGAC
TCTAAGGGGG AGATGACAGG AGCCCAGATA ATGAGGGAGA TTGAGAAGGT CACGCAGGGT
ATCTGGAGGC CCTCTCCAGG AGCGGTTTAT CCGGCACTGG ATAAAATGGA GTCAGAGGGT
CTCATCACGG TATCAAAGGT GGAAAGGTCA CAGCGTTACT ACGCAATCAC AGAAAAGGGG
AAGAGGTTGC TCTCGCCTCA GGGCAGTCTG GAGGTAGTAA TAGGAGACCT AGAGTATAAC
GTTAGATATC TTCTGGATAA TAGGGATCTC CTCACCCCAG ATCTTAAGGA GAAATTGAAG
GAGATCCTCG AGGAGATGGA GGCGATTCTC AAGTGA
|
|---|
| Protein sequence | MFGQWQRKRG LANLILTLLD SKGEMTGAQI MREIEKVTQG IWRPSPGAVY PALDKMESEG
LITVSKVERS QRYYAITEKG KRLLSPQGSL EVVIGDLEYN VRYLLDNRDL LTPDLKEKLK
EILEEMEAIL K
|
|---|
| |