| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0859 |
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| Symbol | |
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| ID | 5105218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 792079 |
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| End bp | 793515 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506763 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001190956 |
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| Protein GI | 146303640 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGAT CGATTATCCT CTTTGTCCTA GTGCTGGGAA CGTTAATGGC TGCCGTAGAT
TCAACCGTCG TCCTTTTGGC TCTTCCCACG ATCACCACCG ACTTAAGAAC TAACCTCGAT
CTCGCCATTT GGACTATCCT GATTTACCTG TTGGTAGTCG CAGTGATGAC AACTCAGCTC
GGAAGAATTG GTGACATCTT GGGAAGATCT AGGATGTACA ATCTAGGTTT CGCAATTTTC
ACAGTGGGAT CTGCGCTCTG CGGTTTATCT CCTACCGCTG ACATGTTAGT AGCTTTTAGG
GCTGTACAGG CCTTTGGGGC CTCCATGCTT CAGGCCAATT CTGGGGCAAT CATAGCTGAC
ACCTTCCCCC CAAATCAAAG GGGAAGGGCT TACGGTTACA CCTCCATAGG CTGGAACGTG
GGGGCAACTC TTGGGATAGT GGTGGGCGGA ATCCTGACAA CCCTAGTTGG ATGGAGATAC
ATCTTTTACA TCAATGTTCC CATCGGAATT GTGGCAATCC TTCTAGGGGT AAAATACGTC
AAAGACGTTC AAGAGAGAAG GAAGCAAAAA CTTGACATTC CAGGAATGGT CCTATTGCTA
GCTGGACTTT CAGCAATAAC CTATGGAGCA TCTGACGTGG CTGGGAGAGG CATAGATCTG
TTTAACGGAT CTCTCATCGG TGTGGGGGCA ATACTAATTG CGGTGATGTT GGCTTACGAG
AGGAGAGCTG AAAACCCCAT AATTGACCTG AAGGCGTTTC AGAACAGGGT GCTCTCCTTT
TCCATACTGG CGTCCTTTTT CCAGAGCACT GGATACCTCT CTGTGGTTTT CGTAATCATC
ATGTACCTCC AGGGAATTAG GGGTTTGAGT CCACTGAACG CCTCACTTCT ACTTGTCCCA
GGTTACGTGG TTGCCAGTGC CCTAGGTCCC ATTGCTGGCA GGCTTTCAGA CAGGATAGGT
GCTAGGATAC CAGCTACGCT AGGTATAGCA ATGATGATGG GGGCCATACT GGTTTACCTC
ACCCTCACAA TTACTACCCC ACTGTACATG ATCATTATAG CCTCCGTTAT AGGTGGTTTA
GGTTCAGCCA TGTTCTATCC AGCAAACAAC AGTGCCGTTA TGGCAAACGC TAGGAGGGGG
TTCTACGGAG GGGCTAACGG TCTTCTCAGG ACCCTCGCCA ATCTAGGAAC GCTGTCCAGC
TACGTCCTAA CCCTAACTGT TGCGTCGCTA TCAATACCCA GGTATGTGGC CTTTGAGGTG
TTTCTAGGAA CCACGGATCT GTTAGGTGGT GTGGAGCAGT CTTTCCTCAA CGGTATTAAG
GCAGCTTTGG TGGTAGCACT CTTCATCCTG CTCGTGGCCC TGGTGCTCTC AGCCTCTAGA
GGGAAGGAGG TTAGGGTCGA GAAGATAGAG GGAACAACTA AACCTAGCAC AACCTAA
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| Protein sequence | MNRSIILFVL VLGTLMAAVD STVVLLALPT ITTDLRTNLD LAIWTILIYL LVVAVMTTQL
GRIGDILGRS RMYNLGFAIF TVGSALCGLS PTADMLVAFR AVQAFGASML QANSGAIIAD
TFPPNQRGRA YGYTSIGWNV GATLGIVVGG ILTTLVGWRY IFYINVPIGI VAILLGVKYV
KDVQERRKQK LDIPGMVLLL AGLSAITYGA SDVAGRGIDL FNGSLIGVGA ILIAVMLAYE
RRAENPIIDL KAFQNRVLSF SILASFFQST GYLSVVFVII MYLQGIRGLS PLNASLLLVP
GYVVASALGP IAGRLSDRIG ARIPATLGIA MMMGAILVYL TLTITTPLYM IIIASVIGGL
GSAMFYPANN SAVMANARRG FYGGANGLLR TLANLGTLSS YVLTLTVASL SIPRYVAFEV
FLGTTDLLGG VEQSFLNGIK AALVVALFIL LVALVLSASR GKEVRVEKIE GTTKPSTT
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