| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0856 |
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| Symbol | |
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| ID | 5105215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 789509 |
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| End bp | 790147 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506760 |
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| Product | HTH DNA binding domain-containing protein |
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| Protein accession | YP_001190953 |
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| Protein GI | 146303637 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCCT TATTGTTAAG GGTGAAAGGA CCACTAGAAG TTGAGCTATA CGTTAGGAGG
AGCGATTGCA GGGTAATGCA GGTAATGGGT GAGACCCATA CCGTGATAGA GAAGGTATCA
CCAAGAACCG GGTTTACGGA CCATCTCATA AAGACAGACG TTACTCCAGA GCTTAAGAAG
GAGTTAAGAG ACAAGGGAGT CAGGGTAATT AACCTGGGAG ATTCGAGGAT ATGGGCTAGG
GCACCAAGCT GTTCAGCATG CAGGTTCTTT ACGGGATCAG ACGCCATGAT ACTGAACGCC
TGGCCCCTAA GTAAGGATGA GATAGTGTAT AGGTTACTAG TGCCCTCCAT GGGGTATCTG
AAAGAGTTGC TGTCAGAGCT CAATAAGCTG AACATGAAAC CCAGGGTTAT GAAGTCGAGG
GAGGCAACAG AAAATGATAC CGGACTTACC CCAAGACAGT TACAGGCCCT CATGTTGGCC
TACAAGAAGG GATTCTTTAA CGTGGAGAGG AAGTCCTCCC TCACTGATCT GGCAAAGGTC
ATGGGAATAA AGCCCTCGTC TGCTGAGGAG CTTCTTAGAA GGGCGTTACA AAAGGTCGTG
GGGGAGTACC TGAAGAGCCT GGAGAAGGAT GGTTCCTAG
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| Protein sequence | MRPLLLRVKG PLEVELYVRR SDCRVMQVMG ETHTVIEKVS PRTGFTDHLI KTDVTPELKK
ELRDKGVRVI NLGDSRIWAR APSCSACRFF TGSDAMILNA WPLSKDEIVY RLLVPSMGYL
KELLSELNKL NMKPRVMKSR EATENDTGLT PRQLQALMLA YKKGFFNVER KSSLTDLAKV
MGIKPSSAEE LLRRALQKVV GEYLKSLEKD GS
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