Gene Msed_0851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0851 
Symbol 
ID5105211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp782950 
End bp786753 
Gene Length3804 bp 
Protein Length1267 aa 
Translation table11 
GC content49% 
IMG OID640506756 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_001190949 
Protein GI146303633 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4934] Predicted protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.444099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAAA CTTTTCTAGC TCAATTGACC CTATACCTCT TTATTTTTTC AGTTGTAACC 
CCGGCTTTAA TCAGTGTTGC GAACACTGGT ACCCTTGTCC ATGAAACACT ATCAACTAGA
TTACCGAGTT TCAAGGAGAC CAACCTTTCT GGTAATACTC CCGTGATCGC CTCAATATAC
ATCCCCTTGA GGAACTTAAA CCTTCTCTAT TACTACGCGG AGCAGGTATC AAACCCCGGG
TCGCCCCTTT ACCACAAGTT CCTATCGCCC TCCCAGGTGA AGAATCTATT CTATCCTAGC
GCGGAGTTTT CCAGTGTCAT GAATTACCTA GCCAGTCACC ATGTTCACGT AATGTTTACG
GCCGCAGATT CTGTTATAGT GGTTCAGGGA ACCGCATCAC AACTCTCACA GGTGTTGGGT
ATCCATTATG TTCTCATGAG CAACGGAACA ACTTACTACT ACACGGCAAT GGGAACCCCA
AAGGTGCCTG GAATAGTTAT ATCAAGTAAT GTCTCAGCCC TTTTCTTCTC TCATCCATCA
ACTCTTTTCA CTCAGAGCGA CGTTAACAAG CTTAGGGAGA CAGTTAATCA ACCAAATTTA
ACTGCGCCCA TAGAGGCGTA TAAACTAACT GAGTTGAGAG GAGTCTACAA TGTTTCCTCC
CTGATCAGCA AGGGAGTGAA TGGTACCAAC TACACTGTTG GAATCTTAGA TTTTTACGGT
GATCCATACA TCCAGCAACA GTTAGCATAT TTCGACAAGA TATACAACGT TCCAGCTCCT
CCTAACTTCT CGATTATACC CATTGGTCCC TACGATCCCA ACCTAGGCAT TACCCAGGGG
TGGGCGGGTG AGATAAGCTT AGATGTGGAG TCGGCCCATG CCATGGCACC AGGTGCAAAT
ATTGTGCTTT ACATAGCTAA TGGGAATTTG CCCCTTTCCT CCGTCATTGC CGAGATAGTG
TCCCAGGACA AAGTGGATAC GCTTTCCCAG AGCTTTTCGA TACCTGACGA GTTCATACCT
GAGTTTTCGG GTTCGCTGTT TTATCAGTGC GTCGTTCTCA CTGATCAATA CTATGCCATG
GGTAATGCCG AGGGAATAAC GTTCCTAGCT TCCAGCGGAG ACGGTGGGGG TAGCGGATAC
AGTGCAGGTC CCCTAGGTTC CGTGGGCTAT CCAGCGAGCT CGCCCTTTGT CACGGCCATG
GGTGGTACCA CAACCTACAT AACCTTTGGA GGATTCTCCT TCAATGTTAC AGCATGGTCC
AATTATGGTT TTGTGCCTCC AGGCGTGAAT TACGGAGGTA GTACTGGAGG GATTAGTCAG
GTCGAACCAA AGCCCTACTA TCAGTGGGGG CTTACTACCC CGAAGGGTTT TCCCAACGGT
AAGGAAATTC CCGATATCTC AGCCAACGCC GATGTTTACC CTGGAATCTA CATTGTGTGT
CCAGGGAACG TAACTGCAAT CTCTGGAGGC ACGAGCGAGG CCTCACCTTT AACTGCCGGG
CTTCTCACCT TGGTGATGCA GTATACCCAC TCCAAGCTCG GGAACATAAA CCCTGATCTT
TACTATCTCG CAAAAGCAGA TTATCAGAAG GCCTTCTACC CTATTACCTT CGGTTATAAC
ATACCGTGGG TTGCGTCCTA CGGCTACAAC CTAGTCACGG GATGGGGACA ACTCAACGTT
GGAGAGTTCG CCTCCCTAGT GAAGGATGTA CCCAGTTCCC TATCCATCAT GGTTAACGTG
TCCAATACCA CTATCCTTCC AGGACAGACC CTAGGTGTAA AGGCTAACGT CACCCTCAAT
GGGCAGGCGG TGAATAGCGG TAGCTTTTAC GTTACGTTGG AAACGGTTAG TGGGAACGTC
ACTACGGTGA AGCTAAACGA CGAGGGATCA GGTATCTGGT CAGCTAGTCT AGGTGTACCT
GAGAACGATA CCGGTATCAC TTTTGTGACT GTGTGGGGAG AGTCCAATGG GACTAGCGGA
TACGGAATTG TGGAGACATA TTCCGGTTAC TTCGTTCAGT TCCTATTCCC AGCTCCCTAT
CAGGTATGCT GGACTGGCTC GGGCATAAAC GTTGTGGTCA ACGTTACAAG TCCCTCTGGA
GGGATTGCCC CCAATACCAC AGTCCTGAAT CTAAACGTGT ATTCGTATAA CGTAACCAAT
AACTCCTTTA CCCTCGTCAA TCAAACCTCC CTAACCTTCA ACCCCGTGTT TAATGCGTGG
AGTGGTATGA TACAGGGCAA TTTCCCCGCT GGTCCTCTTC TTCTACAGGT GGTTAATGCC
TACGGCTACG ACGCAATCTT TAACGGGATA GGCCTCAACT CTTTCTTCAT CCTTTCCCCA
ACCATAGCCG AGCCCGGCAC CGTCTATCCA GGTCAGGACA TCATTATCGA GGGAGGGCTG
ACTCCACCCA CTAACCTAGT GTCGTCAGCT CCTAGGACGG CAAGCGACCT GATGACCGGT
TCCAACGTCA CCGCGGAACT TCTATATAAC GGTCAAGTGA TATCTAAGAC TCAGGTCCTC
TACACGGGGA CGACCTATCT AGGTTACCTG AGAGTTCCAG AAAACGCCAG CCCCGGACTC
TACACTATCC TCCTCTTCGC GTCCTACGAC TCGTATACCC TGAACGAGAC AATTCCTGGG
TTTTACTACG GTCAGATCTA CGTTGGATCC AGGGTTGTGA CGCCACTAAA CTTCTCTAAT
ACCTACGTGA TCCAGGGATC TACACTCTAC ATTTACAGCA ATATAACAGC TAATGGGAAG
GTTGTCAAGT ATGGAATGTT CTCCGCCACC GTGTTCCCTA CACTCCTTAC CCAAGAGTAC
TCGTTGATCT CGACTGTGCT AGAGGTTCCA CTGTGGTATA ACTCCACTAG CGGGTTGTGG
ACCGGAAACG TTACCCTGCC CTCAACGTTA TCCCTAGGTA ACTTGACCTA TCTAGGTAAT
TCCTACTTTG CTGAGCCCTT TAAGGTTCTA GTCACTGGAG TTTCAGCCTA CGGGGGTGTC
ACATCTACCA ACGTCTCCAA TTCGAGAGAA TTCTTCGTGG AACCCTACAC CCTGATCACT
AACGATCCGT CATATACAGC TGTCCAGACT TATGATTCAG CGTTCCAGAA CGACACGCTT
ACCGTTAATG GGAACCTGGT GAACGATCTC TTCCTGGGGA ATAATACCAT AATTAATAGT
CACGTAACAA TTACCCTATC CAACGTTACT GGAACGCTTA TACTGAGGAA CACTCAGGCC
ACGCTGGTAA ATGTGTTGGC CAATAAACTA GTCCTGATTA ACAGTACTGT GAGGCTAATC
GATTCCCAGG TCCAAGACCT AGTGGCCCTC TCCTCCGTGG TATCACCTAT CCAAACTAGA
ATAACCAGCA TAACTCCGGG ACCTCCCATA ATACAGCTGG GAATTGCCCC CTATCAGAAC
ATCACTGGAA ACGTGACAAT TTCAATCACG GTACAGGGAC AGGACGTGGA ACAGGTCCTG
GTGTATCTAG ACGGACAGTT GCTAGCAAGT TTTCAAGGTA ATGGAACTCA CGAAGTTAAC
CTTGACACCC TCAAATACGC TGACGGGACG CACGAGATTA GCGTTACGGC TAATCAGGCT
GACGGTCTTA ACTCGACGGT AACCACGAAC GTGGTATTTG AGAACCAGCT ACAATCCGTG
TCGCAGAAGG TTTCAAATCT CAACGAGACA CTAACTCAGG GAATTTCGAC GGCTCACAGT
ACGGCAAATG TAGGGGAGAT AGTGGCAATA GTTGCCCTAA TTCTGGCGAT CGTGGGTATA
GCCCTGGACT TTAGAAGGAG ATAG
 
Protein sequence
MGKTFLAQLT LYLFIFSVVT PALISVANTG TLVHETLSTR LPSFKETNLS GNTPVIASIY 
IPLRNLNLLY YYAEQVSNPG SPLYHKFLSP SQVKNLFYPS AEFSSVMNYL ASHHVHVMFT
AADSVIVVQG TASQLSQVLG IHYVLMSNGT TYYYTAMGTP KVPGIVISSN VSALFFSHPS
TLFTQSDVNK LRETVNQPNL TAPIEAYKLT ELRGVYNVSS LISKGVNGTN YTVGILDFYG
DPYIQQQLAY FDKIYNVPAP PNFSIIPIGP YDPNLGITQG WAGEISLDVE SAHAMAPGAN
IVLYIANGNL PLSSVIAEIV SQDKVDTLSQ SFSIPDEFIP EFSGSLFYQC VVLTDQYYAM
GNAEGITFLA SSGDGGGSGY SAGPLGSVGY PASSPFVTAM GGTTTYITFG GFSFNVTAWS
NYGFVPPGVN YGGSTGGISQ VEPKPYYQWG LTTPKGFPNG KEIPDISANA DVYPGIYIVC
PGNVTAISGG TSEASPLTAG LLTLVMQYTH SKLGNINPDL YYLAKADYQK AFYPITFGYN
IPWVASYGYN LVTGWGQLNV GEFASLVKDV PSSLSIMVNV SNTTILPGQT LGVKANVTLN
GQAVNSGSFY VTLETVSGNV TTVKLNDEGS GIWSASLGVP ENDTGITFVT VWGESNGTSG
YGIVETYSGY FVQFLFPAPY QVCWTGSGIN VVVNVTSPSG GIAPNTTVLN LNVYSYNVTN
NSFTLVNQTS LTFNPVFNAW SGMIQGNFPA GPLLLQVVNA YGYDAIFNGI GLNSFFILSP
TIAEPGTVYP GQDIIIEGGL TPPTNLVSSA PRTASDLMTG SNVTAELLYN GQVISKTQVL
YTGTTYLGYL RVPENASPGL YTILLFASYD SYTLNETIPG FYYGQIYVGS RVVTPLNFSN
TYVIQGSTLY IYSNITANGK VVKYGMFSAT VFPTLLTQEY SLISTVLEVP LWYNSTSGLW
TGNVTLPSTL SLGNLTYLGN SYFAEPFKVL VTGVSAYGGV TSTNVSNSRE FFVEPYTLIT
NDPSYTAVQT YDSAFQNDTL TVNGNLVNDL FLGNNTIINS HVTITLSNVT GTLILRNTQA
TLVNVLANKL VLINSTVRLI DSQVQDLVAL SSVVSPIQTR ITSITPGPPI IQLGIAPYQN
ITGNVTISIT VQGQDVEQVL VYLDGQLLAS FQGNGTHEVN LDTLKYADGT HEISVTANQA
DGLNSTVTTN VVFENQLQSV SQKVSNLNET LTQGISTAHS TANVGEIVAI VALILAIVGI
ALDFRRR