Gene Msed_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0833 
Symbol 
ID5105194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp761980 
End bp763932 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content52% 
IMG OID640506738 
Productprotein kinase 
Protein accessionYP_001190932 
Protein GI146303616 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTACG CTTTCATCCG AGATAACAAG GTTTACTTGC TGTCCAACGG CGTGTTGACA 
GAGATTAACG AAAGGTTGAA GGTTAAGGAC AGCGTTATGG GATATGTCGT ATCGGAGGAA
GGAGGAAAGA TAAGGTTCAC GAAGGTTCCG ATTCACGATT GTTCCAGGCT TTCCTACTTT
TCCGGCGTTT TGAGGGATTA TCTAAAAGGT TCGGTGGCCG TATTTGAGTC CTCAGAATCT
GCTTGCGTTC TGCTCAATCC ACCTTCCCTA AAGACTGGAC TAACTTACGA CCTCGTTGCC
GGGAGGGTGT TTCTTAGGGG AGATAAGAGG TCAGTCATGG AGGCCATGGA TCAGTATGAC
GTGGTTAAGT TTGCCCTCGA GAGGTACGGA GATGAGGAGG TCAAGAGGAG GGCAGTTATC
TCTCTGGTTA GGCTGGACAA GTGCGACGAG GCTATTTCCC TGTATACCTC CCTGAAGGAG
AAGGACCCCG AGGAATCGCT TGCGGTAGCT GAGTGCTACG AAAAGACGGG GAAGGAACTT
GAGGCCCTTA AGATTTACTC CTTCTTTTCG GAGGAAAAGT ACAGAGAACT GGAGAGTAAG
TTGATAGCTA AGGCTGACGC TCTCATCACA GAGTTCGAGA AGCAGGGCAA TCCCAAACTG
TTGATTGAGG CTCTCAACGT TCTACCCACG TACGATATTC CAGCTGTGAA GCTTGGGCTT
CACTACCTTA ACAAGAACAA GGTGGAGGAG GCAGTGAACA TGTTCGAGGA AGCCCTCAGA
AGGAACAGAA ACTTCCAGAA CCTAGTCCTC TTGGGATCGG CACTCCTAAG GAAGGACCCC
AAGAGGGCGC TCGAGGTCTT GGATGAGGCC CAGAAGATCA GGAGAACGGC CCCCCTTGCA
TACCTGAGGG GGAAGGCCTT TGAGGCCCTC AACTCTCCAC CCCACGCAAT GAGGGAGTAC
CTCTACGCCT GCAGGGAGGG CGTAGTAGAG GCCTGCTCCA AGGCCATACC CGCAACTAGG
CAAGAGTTTG ACCCGGACCA GTGGATAGGT TACGTCCTAT ACGGCTACGA GATAAGATCA
GTCCTTGGGA GAGGGGGGAT GGGTTACGTC CTACTCGCCG AGAAGAACGG GAAGCAGTTT
GCCATGAAGG TAATGAAGAA GGAGTACAGG ATGGACGAGT TCCTGTACGA GGTCGCAAAG
ATGCAGGAGA TCTCCAAGGG CTCTAGGAAT ATGGTGAGAA TCCTTGCGAA CTTCATAGAC
GAGAACTGGA CCGACTACTA CGGTTCTCCC CCAGCGATTG TCATGGAGTA CATGGCTGGG
GGTGACCTTA GGAGGATACT GGCGGATGAG GAGTACTCGT CTCTAAGGCA CTCCGTAAGA
TGGGGAGAGG TTGTTTCCCT GATCTACTCC CAGATCGCAG ATGCCGTGAT TCACCTCCAC
AAGCAGGGAT ATGTTCACGC TGATATAAAG CCCTCGAACA TCCTATTTGA CAGGGCCTTG
TCTAAGTATG GGGAGGAGGC TGAACAACAG CTGTTGAAGG GAGACGTAAT TCCTAGGTTA
TCCGATTTCG GTAGCTCCAT CAGGGTAGGT TCCCCCGTTA TTCACTATAC ACCCTATTAC
GCTCACCCGA AGCAGAGATT CGGAGGGAAA GCCGAGACCA GCATGGATGT TTACTCCTTC
GTTGTGTCGC TCTACGTTAC CCTGACCAAC AACTTCCCCT ATCCCGAGTG GCTCGAGAGG
GAACTTGAGG AGGCTATTAT CTCTCCCGAG AAAAGGGCTG ACGCTCTCAA GGACTTCTAT
TCTGTTGAGC CAAGGATGGA CTACGTTCCT CAGGAGTTCA GGGAGATAAT CCTGTCCGGA
CTTAGGGGAG ATCCAACCAT GGAGCAGATA AGGAGGGAGT TACTGTACGT GGCCAAGTAC
GACTACAACC TTCCCGTAGA GGTTAGCGTA TAG
 
Protein sequence
MSYAFIRDNK VYLLSNGVLT EINERLKVKD SVMGYVVSEE GGKIRFTKVP IHDCSRLSYF 
SGVLRDYLKG SVAVFESSES ACVLLNPPSL KTGLTYDLVA GRVFLRGDKR SVMEAMDQYD
VVKFALERYG DEEVKRRAVI SLVRLDKCDE AISLYTSLKE KDPEESLAVA ECYEKTGKEL
EALKIYSFFS EEKYRELESK LIAKADALIT EFEKQGNPKL LIEALNVLPT YDIPAVKLGL
HYLNKNKVEE AVNMFEEALR RNRNFQNLVL LGSALLRKDP KRALEVLDEA QKIRRTAPLA
YLRGKAFEAL NSPPHAMREY LYACREGVVE ACSKAIPATR QEFDPDQWIG YVLYGYEIRS
VLGRGGMGYV LLAEKNGKQF AMKVMKKEYR MDEFLYEVAK MQEISKGSRN MVRILANFID
ENWTDYYGSP PAIVMEYMAG GDLRRILADE EYSSLRHSVR WGEVVSLIYS QIADAVIHLH
KQGYVHADIK PSNILFDRAL SKYGEEAEQQ LLKGDVIPRL SDFGSSIRVG SPVIHYTPYY
AHPKQRFGGK AETSMDVYSF VVSLYVTLTN NFPYPEWLER ELEEAIISPE KRADALKDFY
SVEPRMDYVP QEFREIILSG LRGDPTMEQI RRELLYVAKY DYNLPVEVSV