| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0813 |
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| Symbol | |
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| ID | 5105136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 742302 |
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| End bp | 743162 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506718 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001190912 |
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| Protein GI | 146303596 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.038465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAGATA TCCTAGATAG GGCGGAGGAA CTCATAGAGG AGAACAGATT GGATGAGGCG
CTTTCCATAC TGAGAGATGT GGAACTCGTA GAGGCCTTCG TCTTGAGGGC AGATATTTTA
CGTAGATTAG GGAAAGTCGA TGAGGCCTTG AGAATATTAG ACAAGGGAAT GGAAAAATTT
CCCTTCAGTT ACGTGATCTT GTCGTCGAAG GCAGAAATCC TAGAGAGCTT GGGAAAGCTA
GACGAGGCCC TGAACACGAT AGATGAAGTC CTAAGCATAA TACCCTACTC CTCTGAACAT
CGCTTTGTGA AGGCCAGACT ACTCTTTAAA CTGGGAAGGT ATGAGGAAGC TAACCTTGAA
CTGGCAGAGG TTCTCAGGGT AAATCCTAGG AATGTGGATG CTCGTATCAT GAAGGCCTTC
TCCTACTACA ATATGGGACT CAAGCTAGAT GCCCTATCCG AAGTTAACAG GGCACTCGCC
TTCAAGAAGG ACGATCCAAA GCTTCATGCG CTCAAGGGAA AGATTTACTT CGAGACCGGT
TATCACAAGC TTGCGTTGAG CGAGTACAAG ATAGCCTCTC ATTACGAACC TGACAACCCA
GATCATTATT ACGACATTGC CCTGTGTTAC TACACCTTGA AGATGATGGA TGATGCCCTC
CTCTACGTGG ATATGGCGAT TGCCAAGGGC AAGAAGGCTA TCTATCATGC ATTGAAGGCG
TCAATACTTA AGGAGATGGG CAAGGACCCA TCACAGGAGA TTAGGACTGC GATAGAGCTG
GATCCCTCGA TTAGGTCAAC TCTTGAGAAC CTTTTGAACG TGAAAATATC TCCAGATGGA
AATATCGATA AAATGAAGTG A
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| Protein sequence | MEDILDRAEE LIEENRLDEA LSILRDVELV EAFVLRADIL RRLGKVDEAL RILDKGMEKF
PFSYVILSSK AEILESLGKL DEALNTIDEV LSIIPYSSEH RFVKARLLFK LGRYEEANLE
LAEVLRVNPR NVDARIMKAF SYYNMGLKLD ALSEVNRALA FKKDDPKLHA LKGKIYFETG
YHKLALSEYK IASHYEPDNP DHYYDIALCY YTLKMMDDAL LYVDMAIAKG KKAIYHALKA
SILKEMGKDP SQEIRTAIEL DPSIRSTLEN LLNVKISPDG NIDKMK
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