| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0812 |
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| Symbol | |
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| ID | 5105135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 741114 |
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| End bp | 742181 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506717 |
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| Product | formate-dependent nitrite reductase membrane component-like protein |
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| Protein accession | YP_001190911 |
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| Protein GI | 146303595 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0296329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCTAT TTAGCGCACC TTCTCCAGGG ACTTCCTTCG GAATACAAGC ACCGATAATA
CAGATAAATC AGTACCCGTT GTGGAGCGAG TACGTAGCTC TCGCGTTGTA TTTTACGGAA
ATCGCGGGAA TGCTGATGGC AATTATAGGT CTCATGGAAG TTACAGGGAG GTTCACATCT
TTCACTAAGA GGGCTTCGGT GGTTACGTTT ATTGCAGCCA TTTTGGCTCT AGGTTTCTTC
GATATGGATC TAGGGAGACC TTCCGCTGCG ATAACCTCGC CAATTGAGGC GTTTGCCAAC
TTTGGACACT CGTGGATGGC TAGGGGTATA ATCTTCGTCG GCGGACTCTT GCTCTTCTCC
TTCCTTTACA TGGTAGTAAG CCTGGCTAAC ATGAAGAGCA GGCTGATTAG GGGAGTAATA
GCGGTTATAG GAGTTTTCGC AGGTATTTTC TCCACGACGT ATAGCGGCTT TGAATTGGCT
GCGACCACCG GAGTACCCTT CTGGAATAAC GGCGGAATTC CTGCACTGTA TCTAGCGGAT
GGAATATTTG CTGCTACGGG TTTAGCTTAC CTTATTGCCT TAGTTGGTAA GAGCGAGGAA
ATGATTAGGG CTAGGGTAAC GTTAACCAAG CTACTTATGT TTTCTAGCGT TGCTGAATTA
GCCACGTGGT TCCTCTTCAT GGCATCTGTT AACTTCATTT ACGTCTTCGA TCAGGTTGCC
TATAACTACC TAGTCTCCCA GGCATCTTTC TACGCAGACA TGGCCCTTAC TGCGCTCACA
TTAGTGATAT CTGGAGTAGG CTATCTAAGC ATTAGTGGTT TACCAATGAT GGGGATGAAG
GCACAGGCTC CGTCTAAGGC AGTCGGGCAG ATGCCTATCA TGGACTTACC CACAGCAGTG
AAGTATCTAG TAGTAGTGGC AGCGATATTT GCACTTGTTG CGGGCTACCT AACTAGGGCT
GATATACTTT TCGCAGGTCA ATACGCCTAT CAGCTTGCCC CCATGACTCC GTTCCAGATC
GTAACCAACC AACCAGTCCC AATAGGAAGC TTCGGGTGGA GAGGATAG
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| Protein sequence | MGLFSAPSPG TSFGIQAPII QINQYPLWSE YVALALYFTE IAGMLMAIIG LMEVTGRFTS
FTKRASVVTF IAAILALGFF DMDLGRPSAA ITSPIEAFAN FGHSWMARGI IFVGGLLLFS
FLYMVVSLAN MKSRLIRGVI AVIGVFAGIF STTYSGFELA ATTGVPFWNN GGIPALYLAD
GIFAATGLAY LIALVGKSEE MIRARVTLTK LLMFSSVAEL ATWFLFMASV NFIYVFDQVA
YNYLVSQASF YADMALTALT LVISGVGYLS ISGLPMMGMK AQAPSKAVGQ MPIMDLPTAV
KYLVVVAAIF ALVAGYLTRA DILFAGQYAY QLAPMTPFQI VTNQPVPIGS FGWRG
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