Gene Msed_0783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0783 
Symbol 
ID5103472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp716122 
End bp716487 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content48% 
IMG OID640506688 
Producthypothetical protein 
Protein accessionYP_001190882 
Protein GI146303566 
COG category[S] Function unknown 
COG ID[COG4911] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.690616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTACT CCTATTTTGA CCTTCAGACG GCTAGGGAAC TACTTCCATG GGTCAAGGAA 
AAGCTAAAGA AACTGAAAAC CGCTGAGATC AACGCACAGG ACGCTCTAAT CAATGGAAAG
AAGGAGTATA TCAGACTTTA CTCCATTGAG GTTGAGTCCA TTTTGAAGGA ACTCACCGAG
AAGGGAATAA TCGTTAGGGA CGTGGAGATG GGACTGGTGG ACTTTCCTGC GGTGATTAAC
GACAGGCCTG CGTACCTTTG CTGGAAGGCC GACGAGGAGG ATATCATGTA CTGGCATTAC
GTGGAAGAGG GGTTTAGGGG GAGGAAGAGG ATTTCCCCAA GGGACCAGAT TCTAAGTTAT
CAGTGA
 
Protein sequence
MSYSYFDLQT ARELLPWVKE KLKKLKTAEI NAQDALINGK KEYIRLYSIE VESILKELTE 
KGIIVRDVEM GLVDFPAVIN DRPAYLCWKA DEEDIMYWHY VEEGFRGRKR ISPRDQILSY
Q