| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0781 |
|---|
| Symbol | |
|---|
| ID | 5103470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 712439 |
|---|
| End bp | 713839 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640506686 |
|---|
| Product | selenophosphate synthase-like protein |
|---|
| Protein accession | YP_001190880 |
|---|
| Protein GI | 146303564 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0709] Selenophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.232038 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCTGATC TATTTGAAAG GTTCAGGAAC AATTTGAACA AGTACAAAAG GATGGGTTTG
AATCCCTTGT CCTTGGCTAC AGGATGTGCA GTTAAGGTTG ACTTGATCGA TACCGTGTAT
CCCGCTCTCG AGAAACTCAA GGATAAACTC AGGGAGAACA ACATTGAGGT AATGCCAAGG
GAGGATACGG ACATTTTCGT TAGCAGGGAA TCTGAGGTAA TAAAGAGGGT AATAAATGGA
GGGGAGTTTG ACGCTGACAG GGCTGTCAGT CTAATCCAGG TAAACCAGGA GACGGCAGGA
AATCCCGAGA AATTTGCGAA CTTCCTCCTC AAGATCTACA CTAGCGTGAA GACAAGAAGG
AGACTCGTGG TAGGAAAGGG TCATTCCATC GTGACCACCA ACCCAAAGGC CGAGGTTGGG
GTTCTGGACC TCATAAAACT GGATGGAAAG GCACTTAACT CGTACACGTT GGCTAATAAC
GACACCATTC AGATAGTAGA TCCCCTCGAC GATCCAGGTT CACAGATGCA GGTAGATGTG
GGAATCTCAA ACTCATTGAA CGACCTCTTC ACTAAGGGAG CCTTCCAGGA ACTACGTATG
ATACCGGTGG CGGATGCCCC TGATCCGGAA CTCAAGGAGA CCCTGATGAG GAATTTCGAG
TCCTTCAGCA AGAGGTACGG TGTGGAGTTG TTGCAGGACA TTCAACCGCA GACAGGGACC
TTGATGATAG GGGCAACCGT AATAGGTAAG TCTGACCACG AGTTACCAGT GTTTTACAGC
AGGGTAGATG AAAACATGGA GATCCTAGTT ACCAGGCCCG TGGGGGAGTT AACCCCCATC
AACGTTCACA TGTGGTTACT CACGGTGCCA GAGCTCCTTG AAACCCTGGA GGAGAGGGGG
ATCACGTTGC AAAGGGTGGA GGAGGCCAAG AAGAGGGCCC TGGATTACAT GACGAAGCCG
AATTTCGCCA CGGCGAAGGT GATATACGAA CATCTTCCAG AATTTGGAAA GGAGTTTGAC
CCTAAGGCCC ACATTGCCAT GACCACGGAT GTCACAGGTC CAGGGATCTT CGTGATAAAG
GAGTTCGCTG ACAAGGCCTC TGTGGACGTG GAGCTATACA ACGTGCCAGT TATTGACAGG
GAAATTAACG AGTTTGCAAC GGAGAACTTC ATCATCCCCA ACTCCACGGC AGGGACCAAC
GGAGCCATTG TCATGTTCGC GTCCAGGAAA GTTATAGACG ACGTTGCTCA GTCCCTGAGC
AGGGCCGGAC TGGAGCCCAG CGTGATAGGA AGGGTAATTG GGAAGGGAAA CGGAACGGTT
TACGTGAAGA GGGAAGTGTG CAAGTTAATA CACAGGGAAA ACATTCTCAA GTACTTTAAG
GTAAAAGATC CTCAGGCCTG A
|
|---|
| Protein sequence | MADLFERFRN NLNKYKRMGL NPLSLATGCA VKVDLIDTVY PALEKLKDKL RENNIEVMPR
EDTDIFVSRE SEVIKRVING GEFDADRAVS LIQVNQETAG NPEKFANFLL KIYTSVKTRR
RLVVGKGHSI VTTNPKAEVG VLDLIKLDGK ALNSYTLANN DTIQIVDPLD DPGSQMQVDV
GISNSLNDLF TKGAFQELRM IPVADAPDPE LKETLMRNFE SFSKRYGVEL LQDIQPQTGT
LMIGATVIGK SDHELPVFYS RVDENMEILV TRPVGELTPI NVHMWLLTVP ELLETLEERG
ITLQRVEEAK KRALDYMTKP NFATAKVIYE HLPEFGKEFD PKAHIAMTTD VTGPGIFVIK
EFADKASVDV ELYNVPVIDR EINEFATENF IIPNSTAGTN GAIVMFASRK VIDDVAQSLS
RAGLEPSVIG RVIGKGNGTV YVKREVCKLI HRENILKYFK VKDPQA
|
|---|
| |