| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0779 |
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| Symbol | |
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| ID | 5103468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 710971 |
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| End bp | 711837 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506684 |
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| Product | periplasmic solute-binding protein-like protein |
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| Protein accession | YP_001190878 |
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| Protein GI | 146303562 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2107] Predicted periplasmic solute-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.124322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAACAA TAAAGATTGG TGCCCTGGCG GATTCTGGGG ACCTGTACCC CTTCATTCCC
ATGATGGAGG GTTGGGTTAA GGAAGACGGG ATAAACCTGG AGTTTCAGGT AATACCCACA
GTTCAAGACG TCAATATGAG CGTGCTCACC AAGGTTGTGG ACGTTTCGGT CCCCTCAGCT
GCAATGTATC CGTATATTCA GGACGACTAC TTCATTTTAG GCAACGCAGT GGCCACGGCT
ATTGACGGGA TCACGGGTAT GCCAGTCCTC TCCACTAGCG AAATGAGACT TGATGACCTA
AAGAAGTCCA CACTCATAGT CCACGGGCCT AACACCTCTG CCTTTACCCT CTATAGGCTT
CTGGTTGGCA AATACGGTAA ACTGGTAATA ATTCCAAGGG TTCTTGACGA GATCAAGGAG
CTGGGGAAAA GCGGTGATGT GTTGGTAGCG GTCCACGAGA TAAAGATGAT GTACGCCATG
AGGAAACTGG GCATAAAGCC CTACGTCATT ACAAGCATGT GGGATATGTG GTCTAAGATT
TCTGGGGGAG CTCCAATGCC CATGGGGACG GTGGTAGTAT CAAAGGAGCT GGGTAAGGAA
ATGGCCCTCA AGTTCAAGGA ATTATATGAG AGGAGCAAGA AGTTCGCGGA GAAGAACCTT
GACAAGGTGA TTCCTAGGGA CGTAGAGATA ATGAGTGAGG CTCAGGGAGT AAACATGGAC
AGAGAGATCG TGGAGAAGAC CATATGGGCC GACATTCAGG AGTACAACGT GCCTCAGGAA
AAGGCTATGG AAGGCTTAAA CAAGTTCTAC AGCCTAACTC ACGAGAGAGG CCTTCTACCC
CTGGTCAAGA GCATAGACGT AATCTAA
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| Protein sequence | MVTIKIGALA DSGDLYPFIP MMEGWVKEDG INLEFQVIPT VQDVNMSVLT KVVDVSVPSA
AMYPYIQDDY FILGNAVATA IDGITGMPVL STSEMRLDDL KKSTLIVHGP NTSAFTLYRL
LVGKYGKLVI IPRVLDEIKE LGKSGDVLVA VHEIKMMYAM RKLGIKPYVI TSMWDMWSKI
SGGAPMPMGT VVVSKELGKE MALKFKELYE RSKKFAEKNL DKVIPRDVEI MSEAQGVNMD
REIVEKTIWA DIQEYNVPQE KAMEGLNKFY SLTHERGLLP LVKSIDVI
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