Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0778 |
Symbol | |
ID | 5103467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 710433 |
End bp | 710942 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640506683 |
Product | hypothetical protein |
Protein accession | YP_001190877 |
Protein GI | 146303561 |
COG category | [S] Function unknown |
COG ID | [COG1986] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00258] inosine/xanthosine triphosphatase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.108988 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGTTT GCGTGGGTTC AACAAACCCA GTTAAACTTG AGGCTGTAAA GGATGCAATC AAGGAGATAG GGAAGGAGTG GGAGATTAAG GGAGTTCAGG TGAGCTCCAA CGTCAGTGAA CAGCCTTGGT GCAATGAAAC TCTTGTTGGG GCGAGAAATA GGGCCATTAA CGCGTTAATT CAGGAGGGCT GTGATGTGGG AGTAGGAATA GAGGGGGGTG TTTGTTGGGA GAGAGAAAGG ATTGTGGCCT TCGCGGCTAT ATATGTTGTT AACAGGGAGA AGGAGAATTT CTCTTACTCT CCAGCATTCA CCCTATCCAA CGAACTTGCA AAGCTTGTGA TAAGGGGAAA GGAGCTCGGT GAAGCCACGG ACATAGTTTA TGGGAAGACC AACACCAAGC ATGGGGAGGG AGCGGTTGGT ATGCTTACGA AGATCGTGGA CAGAAAGAGA CTTTACAAGG ATGCCGTGAT ACTTGCGTTA TACCCATTTT ACATGGAGAG TGAAAGGTAG
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Protein sequence | MLVCVGSTNP VKLEAVKDAI KEIGKEWEIK GVQVSSNVSE QPWCNETLVG ARNRAINALI QEGCDVGVGI EGGVCWERER IVAFAAIYVV NREKENFSYS PAFTLSNELA KLVIRGKELG EATDIVYGKT NTKHGEGAVG MLTKIVDRKR LYKDAVILAL YPFYMESER
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