Gene Msed_0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0778 
Symbol 
ID5103467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp710433 
End bp710942 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content48% 
IMG OID640506683 
Producthypothetical protein 
Protein accessionYP_001190877 
Protein GI146303561 
COG category[S] Function unknown 
COG ID[COG1986] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00258] inosine/xanthosine triphosphatase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.108988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGTTT GCGTGGGTTC AACAAACCCA GTTAAACTTG AGGCTGTAAA GGATGCAATC 
AAGGAGATAG GGAAGGAGTG GGAGATTAAG GGAGTTCAGG TGAGCTCCAA CGTCAGTGAA
CAGCCTTGGT GCAATGAAAC TCTTGTTGGG GCGAGAAATA GGGCCATTAA CGCGTTAATT
CAGGAGGGCT GTGATGTGGG AGTAGGAATA GAGGGGGGTG TTTGTTGGGA GAGAGAAAGG
ATTGTGGCCT TCGCGGCTAT ATATGTTGTT AACAGGGAGA AGGAGAATTT CTCTTACTCT
CCAGCATTCA CCCTATCCAA CGAACTTGCA AAGCTTGTGA TAAGGGGAAA GGAGCTCGGT
GAAGCCACGG ACATAGTTTA TGGGAAGACC AACACCAAGC ATGGGGAGGG AGCGGTTGGT
ATGCTTACGA AGATCGTGGA CAGAAAGAGA CTTTACAAGG ATGCCGTGAT ACTTGCGTTA
TACCCATTTT ACATGGAGAG TGAAAGGTAG
 
Protein sequence
MLVCVGSTNP VKLEAVKDAI KEIGKEWEIK GVQVSSNVSE QPWCNETLVG ARNRAINALI 
QEGCDVGVGI EGGVCWERER IVAFAAIYVV NREKENFSYS PAFTLSNELA KLVIRGKELG
EATDIVYGKT NTKHGEGAVG MLTKIVDRKR LYKDAVILAL YPFYMESER