Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0745 |
Symbol | |
ID | 5103783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 678980 |
End bp | 679489 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640506649 |
Product | hypothetical protein |
Protein accession | YP_001190844 |
Protein GI | 146303528 |
COG category | [S] Function unknown |
COG ID | [COG2090] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.120646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.172473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGCCA CTGACGTGAT TACCTGTTTC GGACATGAAA ATGTTCTAGC CAAGCATAGG ACAACCCTGG AGATAACCAG AGAGAACTTT CTTACCAAGA GAGGGGATTG TATTATCTGT ATTAACTCAG ATAAGGGAGC TCTTCATCTA TCCAACGAGG TGAAGGATAT TCTTAGAAAC GAGGGATATG GCTACCTTGT TATCATGAAG GATGGCTTCA TGGACATGGT TATGGGGAGA GGGTCTAGGG ATTTACCCTT CAGCTCGGAT ATAAAGATGA TAGTTAGGAA GTCCGACTTT ATCTCCGACG GTACCATTCT GATTAAGGCC AACAAGTCAG CGAGGGACCT TCGAAGGGAC TTGATACCCA GGCTGAGACA GGGGGAAATA AAGGTGCTAC TCGTCGCATC TCAGGACCCG CTTCATGATG ACGAGATCCT TAGAATAGTC GTTAACCTTT TCCCATCCTT CCTGAATTCT TCCCAGCTTG TACAGGATCA CGGATCTTGA
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Protein sequence | MIATDVITCF GHENVLAKHR TTLEITRENF LTKRGDCIIC INSDKGALHL SNEVKDILRN EGYGYLVIMK DGFMDMVMGR GSRDLPFSSD IKMIVRKSDF ISDGTILIKA NKSARDLRRD LIPRLRQGEI KVLLVASQDP LHDDEILRIV VNLFPSFLNS SQLVQDHGS
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