Gene Msed_0745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0745 
Symbol 
ID5103783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp678980 
End bp679489 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content45% 
IMG OID640506649 
Producthypothetical protein 
Protein accessionYP_001190844 
Protein GI146303528 
COG category[S] Function unknown 
COG ID[COG2090] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.120646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.172473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCCA CTGACGTGAT TACCTGTTTC GGACATGAAA ATGTTCTAGC CAAGCATAGG 
ACAACCCTGG AGATAACCAG AGAGAACTTT CTTACCAAGA GAGGGGATTG TATTATCTGT
ATTAACTCAG ATAAGGGAGC TCTTCATCTA TCCAACGAGG TGAAGGATAT TCTTAGAAAC
GAGGGATATG GCTACCTTGT TATCATGAAG GATGGCTTCA TGGACATGGT TATGGGGAGA
GGGTCTAGGG ATTTACCCTT CAGCTCGGAT ATAAAGATGA TAGTTAGGAA GTCCGACTTT
ATCTCCGACG GTACCATTCT GATTAAGGCC AACAAGTCAG CGAGGGACCT TCGAAGGGAC
TTGATACCCA GGCTGAGACA GGGGGAAATA AAGGTGCTAC TCGTCGCATC TCAGGACCCG
CTTCATGATG ACGAGATCCT TAGAATAGTC GTTAACCTTT TCCCATCCTT CCTGAATTCT
TCCCAGCTTG TACAGGATCA CGGATCTTGA
 
Protein sequence
MIATDVITCF GHENVLAKHR TTLEITRENF LTKRGDCIIC INSDKGALHL SNEVKDILRN 
EGYGYLVIMK DGFMDMVMGR GSRDLPFSSD IKMIVRKSDF ISDGTILIKA NKSARDLRRD
LIPRLRQGEI KVLLVASQDP LHDDEILRIV VNLFPSFLNS SQLVQDHGS