| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0727 |
|---|
| Symbol | |
|---|
| ID | 5103765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 662369 |
|---|
| End bp | 665338 |
|---|
| Gene Length | 2970 bp |
|---|
| Protein Length | 989 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640506631 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_001190826 |
|---|
| Protein GI | 146303510 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGTATTA GAGAAGAGCT AGAGGGTCGA TTTGGCGATA GTTTCTCTGA CTCCTTGGTG
GAACGTCTCT CCCATACAGC GGATATGGGT TTTGTGCCCC AATTAGTTTG GACTGGAATG
AAAATTAACA TTATCCCCGA CTACGTGGTA TATCCCAGAA ATGTCGAAGA TCTAATTGAC
CTAGTTAGGA TAGCCAACAA GTATAACATA CCCATAACCC CATATGGCAG GGGTACTAAC
AGGTATGGAA ATGCCATACC TGCAGATGGC GGTATAGTAG TTGATTTCTC TAAACTGGAC
AAAATACAAA TAGATGACGT TAATAAGATC GCCGTGATTG AGGCAGGGGC CACATGGAAG
TTCGTGGATA TAGCTGCTCA GGCCAAGGGA CTTCAGCTTA GAACGTTCCC ATCCTCTTAC
GACTCCACAG TGGGAGGAGG AGTAGCGGGC GATGCCTTAG GAGTTGGATC TTATCAATAC
GGGTATATCT GCGACAACGT AGCGTTTGTA GAGATGGTAA ATCCCAAGGG AGAGCTAGTT
AGACTCGAGG GGAAAGATCT AGCCCTTGTA TGTGGAGCCG AGGGTACGAC AGGTCTAATT
TATAGGGTTG GAATGAGGTT AAGGCCGTTT TCGCCCACAG AATCCCTAGT CCTATCTTAT
GATAATTTTG AACAGGCATA TAGGGGTATA GGAGAGTTCT ATAGGGAATC CATCCCTGCC
TGGCACATCC AGGTTAGAGG ACCCGCAATA TCCACTTACA TTGCGGAGAA CTTCAAGGCT
TCCCTGGCCC CGGAAAAATG GAATATGGTT GTCCTTTATC CATCTAATGT TTCCTCAATA
GTTGAGCCAA AACTGTATAA GGTTGCCCAA AATACTGGGG CCAAGACCTT TGAGGGCGAA
TGGACCGGTT GGTGGTCCTT TAACCACGGT GTCAATGCTG CCCTCAGAAC TAAGGGGCTC
CTAATTCATC AACATGGTCT CATTCATTAC ACTAAGATAA AGGAGTTAGT TGATGGCATC
CAGGACAATT TGGGCAAACT AGGGGATCTT ACTCCCGACG GAGGGTTTGA CCTAGATATA
GACTTGGAGA GAAGGGAAAC TCTCCTGGTA AACGCCTTCA CGCAGGTTTC CCTTACTCCG
ACAGATAAGA AGATTCTCTT TGAGCTGGCA AAGAATACGC TAATGATGGA GCAATACATC
AAGGTCGGAG GGTCCATGCT ATCTGTGGGG ATATTCGTTC ACAAGTACGC TAAGAATAGG
CTAACTGCAA TGGGTAAAGT ATTCCAAGAA ATGGGCGTTG ATAGATATGA GGTAATGAAA
AAGTATAAGC AAGAGATGGA TCCCAATGAG ATATTTAATC CTGGTAAGGT CTTTGAGCCA
ACCAAGAGGG CCAAGGAAGT TTTGGACATA GTGAGAAAGC AGAACGAGGC CATGAGATAT
AGGTTTGGAA TAGGTTTCGC GAAGAGGATA TCACCTGGTG GGGAGATACA GGGGTATAAG
GTAACCAAGA AGTATCTTGA TGTATTCACA GATTATGCCA TAAAATGCAT AGACTGTGCC
ATGTGCGTCA CAGTTTGTCC ACAGTATAGG CTTATTCCTC AATGGCCCTA TGCCCCTAAG
GGCATGTTTG ATTTCACTAA AGGTCTAATT TCCATGTTCG AGCTCTATGG TAGGATTGAT
GTTCCCGATA GCGCCATTGC TGAGATCTCA GGATGTCATA AGTGCGGTCT ATGTGATGGT
GTTTGTCCAG CGAGAATTCC CATCTCATCA ATGTTGATCA AACTAAGCTC CATGGTAGCT
AGGAAGACCC CAGATGAGAC AGTTACCGAG ATCCCAATTC CCGAGAAGTA TAAGGACATT
ATATCAGATG ACGCAGAGAT TGGAGTGTGG CTAGGCAAAT ATCTAGCAGA GAATCCCTCA
ACAATGTTTG CCACCTTAGA GATGTTCAAG AAGCTAGGGC TTAAAGTTAA GGTATTCGGT
ACATCTATGG ACAGCGGGTT TAATGACTAT ATTAGCGGAA ACGGTAATGA ATTGATCGAA
AAGATAAAGA AAAATTCTGA GCATATAAAT GTGGTCGAGC TTATCACAGT GTCTCCCGAA
GATTACAAGA CCTTTACTGA AGGATATCAG GAGTACTCGA GGCTAAGCGG AGTTAACCAG
ACCTTCGAGG TAGTACCACT AGATTTGAGG TTGCTGAAGT CCATGCAGAT AGAAGGAAAC
GAGGAGTTAA ACCTTCACGT TGCGTGCTTC TCCAACACCT ATGCAGATGA GATATTGAAG
AGACTCCGGG AGAAAGGGTT TAAGGTAAGG AAGGTTGAGG GGTGCTCTGG CGCAACATTG
GAGAAGAACG TAGGAAAGAG GGCAGACATG ATGGCAAAGG CTCTAGGCGA AAGGTATGGA
ACCTTGGTAA CCCTATGTCC CCTAGCTGCA GTTAAGTTCA GGAGCGTAGG TGTAAACGCT
AAAACACTCG TGGAATTCCT TGCAGAGAAG GTGGGAGCGG GAGTTAAGGT GGAACAAAAG
ATAGTAAAGA TCCCTGACGC TGATAAAAAT GCCATAATAA ATGTATTGGT TCAGTCGCTA
ACAGAAAGTC TAAAGAAGCG TGCGTCAGTG ATAGCGGATA CCGTGTCTTT CATGTCCTCA
GGAATGGATG AGTACAAAAA GATAATAGAG CCCATAGTGA CAGAGGCGAT TGACGAGGCA
ACACCCTCCG TCAAGAACGC TATAGTCTCC ATGGCCTCCA GCAAGTATAC AGGTAACGAT
CCCTCAGAGA AGGCACTTGT TCTGAATCAG TATTATAGGG AGTTCAATAG CATTCTAATG
TCGTTAACCC TGGATACGGT TGTCTCTAGT GTTGTGTCCG AGGTAAAGTC AAAGTCTGTG
GATGAGTTCT CGGAGAGAGA TCTAGGACTA GTCCTCCTGG AGCTATTGAG GGAGAAAATG
GAGAGGATAA GGACAAACGT AGTACAATGA
|
|---|
| Protein sequence | MGIREELEGR FGDSFSDSLV ERLSHTADMG FVPQLVWTGM KINIIPDYVV YPRNVEDLID
LVRIANKYNI PITPYGRGTN RYGNAIPADG GIVVDFSKLD KIQIDDVNKI AVIEAGATWK
FVDIAAQAKG LQLRTFPSSY DSTVGGGVAG DALGVGSYQY GYICDNVAFV EMVNPKGELV
RLEGKDLALV CGAEGTTGLI YRVGMRLRPF SPTESLVLSY DNFEQAYRGI GEFYRESIPA
WHIQVRGPAI STYIAENFKA SLAPEKWNMV VLYPSNVSSI VEPKLYKVAQ NTGAKTFEGE
WTGWWSFNHG VNAALRTKGL LIHQHGLIHY TKIKELVDGI QDNLGKLGDL TPDGGFDLDI
DLERRETLLV NAFTQVSLTP TDKKILFELA KNTLMMEQYI KVGGSMLSVG IFVHKYAKNR
LTAMGKVFQE MGVDRYEVMK KYKQEMDPNE IFNPGKVFEP TKRAKEVLDI VRKQNEAMRY
RFGIGFAKRI SPGGEIQGYK VTKKYLDVFT DYAIKCIDCA MCVTVCPQYR LIPQWPYAPK
GMFDFTKGLI SMFELYGRID VPDSAIAEIS GCHKCGLCDG VCPARIPISS MLIKLSSMVA
RKTPDETVTE IPIPEKYKDI ISDDAEIGVW LGKYLAENPS TMFATLEMFK KLGLKVKVFG
TSMDSGFNDY ISGNGNELIE KIKKNSEHIN VVELITVSPE DYKTFTEGYQ EYSRLSGVNQ
TFEVVPLDLR LLKSMQIEGN EELNLHVACF SNTYADEILK RLREKGFKVR KVEGCSGATL
EKNVGKRADM MAKALGERYG TLVTLCPLAA VKFRSVGVNA KTLVEFLAEK VGAGVKVEQK
IVKIPDADKN AIINVLVQSL TESLKKRASV IADTVSFMSS GMDEYKKIIE PIVTEAIDEA
TPSVKNAIVS MASSKYTGND PSEKALVLNQ YYREFNSILM SLTLDTVVSS VVSEVKSKSV
DEFSERDLGL VLLELLREKM ERIRTNVVQ
|
|---|
| |