Gene Msed_0725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0725 
Symbol 
ID5103763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp660938 
End bp661540 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content44% 
IMG OID640506629 
Producthypothetical protein 
Protein accessionYP_001190824 
Protein GI146303508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATATT ACTATCTAGC TCTAATCTTT GCCATCTCCT TCGCCTCCAA TGCCACCCCA 
TTCTTTGGTG CTCCCTATAC TGTAATATCT TCCACTATTC TTCTAAAATT TGGACTAACC
CCCCTGAACT TTGCGGAAGT TGTTGTCGCG TCCGGTATAG GTGCAGGGAT AGCAAAGAGC
GTCATGTATG GGATAGGGTA CGGAGTGGGA ACTAAACTCA AGGATAACAG GAATGTGAGT
TTCTTTCACA GAATAATTAA GGGGAGGTCC TTCTATTTAG CAATCTTCAT CACTTCAGTA
ATGCCGTTCT TTCCATTTGA TGATTTCGTC TTTCTGATAG GTGGGGCTGG AAAGGCATCT
CTTCTCAAGA TGCTGGAGAT AACGATTCCG TCGAAGGTCC TCAAAAGCTC GTTGGAAATA
GGGATTGAGG CTGAAGGCTT GCTTCAGATT GGCAAAATTA CCAAGATATC TCCTGTGGAG
CTCGGTGTGA TCTCATCCGT GATTTTCGTG ATATTGGGAG TCGTACTATT CAAGATTGAC
TGGGAAAAAC TCTACCTTAG GGTAGAAAGA TACTTTAGAC AGAGATCGTG GACTAACCCA
TGA
 
Protein sequence
MEYYYLALIF AISFASNATP FFGAPYTVIS STILLKFGLT PLNFAEVVVA SGIGAGIAKS 
VMYGIGYGVG TKLKDNRNVS FFHRIIKGRS FYLAIFITSV MPFFPFDDFV FLIGGAGKAS
LLKMLEITIP SKVLKSSLEI GIEAEGLLQI GKITKISPVE LGVISSVIFV ILGVVLFKID
WEKLYLRVER YFRQRSWTNP