Gene Msed_0719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0719 
Symbol 
ID5103757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp656596 
End bp657339 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content46% 
IMG OID640506623 
Productmethyltransferase type 11 
Protein accessionYP_001190818 
Protein GI146303502 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.340392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACTC GGAACGAAAC CGTTCTTAGG ATCTTTGAGT CCGACTTTTA CATTAACGAG 
ATGGTAAAGG TCTGGGAGGA GGGAAAGAAG TGGGCTGATT GGATAGCAGA ACTCACTAAC
CGTTACGGTC TAGGCAAAAG GGTTCTTGAT GTTCCCTGTG GGGTAGGTAG GGTAAGTTCG
TATCTGGTCT CACAGAAATT CGAGGTTACT GGGGTTGATA TCTCCGACAG GATGTTAGAA
ATTGCCAAAA GGAATGTTCC TAACGCGAGA TTTATCAAGG GTGATATGAG AAAGCTCAGC
GAGATTTTAG GGAATGAGAA GTATGACATT GTCGTAAACC TGTTTAACAG TCTAGGTTAT
TACAACGAAG AGGACGACAT GGACATTCTC TTCTCTATCA AGTCAGTAAC CAAGGGGATG
GCAGTACTCA ATCTAGATAA CAGGGACTAC GTCATTTTTA ACATGCCCGA GATCAGATAT
TCCTATGTCC CGCCTTACAT GGTTGTTGAC ACCTCCAGGT TTGAGCCCAC AACCTCCAGA
GTTGAGGTGA TAAGGAAGTA TCTGGATAGC AAGGGTAATG AGGTAGGATC GCTGGAATAC
AGTCAAAGGT ACTACAGCCT CCACGAAGTC GTCAAGATGG CCAAAAGGGC TGGATTTAGG
GTGGTGGACG TGCTCTCAGG TTACTCATGG AAGCCCTTCG AGATAGGAGA TCCGCAGATG
ACACTTGTGT TATCTACTTC CTAG
 
Protein sequence
METRNETVLR IFESDFYINE MVKVWEEGKK WADWIAELTN RYGLGKRVLD VPCGVGRVSS 
YLVSQKFEVT GVDISDRMLE IAKRNVPNAR FIKGDMRKLS EILGNEKYDI VVNLFNSLGY
YNEEDDMDIL FSIKSVTKGM AVLNLDNRDY VIFNMPEIRY SYVPPYMVVD TSRFEPTTSR
VEVIRKYLDS KGNEVGSLEY SQRYYSLHEV VKMAKRAGFR VVDVLSGYSW KPFEIGDPQM
TLVLSTS