Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0712 |
Symbol | |
ID | 5103750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 651487 |
End bp | 652026 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640506616 |
Product | methionine sulfoxide reductase A |
Protein accession | YP_001190811 |
Protein GI | 146303495 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.894466 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACTGAGT TAGCCACTCT TGGAGGCGGA TGTTTCTGGT GCACCGAGGC GGTGTTCTCT AGGGTCAAGG GGGTTGTGAA GGTAGAACCA GGTTACGCAG GCGGATGGGT TCCCAACCCC ACTTACGAAC AGGTGTGTTC TGATACCACG GGTCATGCAG AGGTTGTTCA GATCGAGTTT GATCCAAACG TGATCACCTA CAGGGAACTA CTTGAAATCT TCTTTGAAAT ACACGATCCC ACCACCAAGG ATAGGCAAGG AAACGACGTC GGTAGCCAGT ATAGATCCAT AATTCTGTAC CACAACGAAC AACAAAGAAG GATTGCCCTC GAGGTGATAG ACGAACTAAA CAGGACCAGG TTCAATGGAA GGATCGTGAC CGAGGTGGTT CCCTACACAG CTTTCTATAG GGCTGAGGAC TACCACTTCA GGTTTTACGA CAGAAACAAG GACTATCCCT ACTGCAGGTA TGTAATCAGC CCGAAGGTGA AGAAGTTAAT GGAGCATTTC CCCTCAATGG TGAAAATGAG GGAGAGTTAG
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Protein sequence | MTELATLGGG CFWCTEAVFS RVKGVVKVEP GYAGGWVPNP TYEQVCSDTT GHAEVVQIEF DPNVITYREL LEIFFEIHDP TTKDRQGNDV GSQYRSIILY HNEQQRRIAL EVIDELNRTR FNGRIVTEVV PYTAFYRAED YHFRFYDRNK DYPYCRYVIS PKVKKLMEHF PSMVKMRES
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