Gene Msed_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0712 
Symbol 
ID5103750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp651487 
End bp652026 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content49% 
IMG OID640506616 
Productmethionine sulfoxide reductase A 
Protein accessionYP_001190811 
Protein GI146303495 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.894466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTGAGT TAGCCACTCT TGGAGGCGGA TGTTTCTGGT GCACCGAGGC GGTGTTCTCT 
AGGGTCAAGG GGGTTGTGAA GGTAGAACCA GGTTACGCAG GCGGATGGGT TCCCAACCCC
ACTTACGAAC AGGTGTGTTC TGATACCACG GGTCATGCAG AGGTTGTTCA GATCGAGTTT
GATCCAAACG TGATCACCTA CAGGGAACTA CTTGAAATCT TCTTTGAAAT ACACGATCCC
ACCACCAAGG ATAGGCAAGG AAACGACGTC GGTAGCCAGT ATAGATCCAT AATTCTGTAC
CACAACGAAC AACAAAGAAG GATTGCCCTC GAGGTGATAG ACGAACTAAA CAGGACCAGG
TTCAATGGAA GGATCGTGAC CGAGGTGGTT CCCTACACAG CTTTCTATAG GGCTGAGGAC
TACCACTTCA GGTTTTACGA CAGAAACAAG GACTATCCCT ACTGCAGGTA TGTAATCAGC
CCGAAGGTGA AGAAGTTAAT GGAGCATTTC CCCTCAATGG TGAAAATGAG GGAGAGTTAG
 
Protein sequence
MTELATLGGG CFWCTEAVFS RVKGVVKVEP GYAGGWVPNP TYEQVCSDTT GHAEVVQIEF 
DPNVITYREL LEIFFEIHDP TTKDRQGNDV GSQYRSIILY HNEQQRRIAL EVIDELNRTR
FNGRIVTEVV PYTAFYRAED YHFRFYDRNK DYPYCRYVIS PKVKKLMEHF PSMVKMRES