| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0711 |
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| Symbol | |
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| ID | 5103749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 649608 |
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| End bp | 651281 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640506615 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001190810 |
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| Protein GI | 146303494 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGACA AATCAAGATC TAACAAGGTT TACGGTGGTT ACGAAAAGGC ACCCAATAGG
GCCTTCCTTA AGGCAATGGG CCTAACGGAC GATGATATTT CTAAACCGCT GGTGGGAGTT
GCAGTGGCCT GGAATGAGGC CGGCCCTTGT AATATACATC TCCTAGGCCT GTCTCAGGTA
GTGAAGGAGG GCATAAGGGA ACTTGGCGGT ACCCCCAGGA CTTTCACGGC CCCTGTCCTA
ATAGATGGAA TAGCCATGGG AAGCGAGAGC ATGAAGTACT CTCTGGTGAG CAGGGAAGTG
ATTGCGAACA CTGTGGAGTT AACTGTGAAT GGGCACGGCT ACGACGGGTT CGTGGCACTG
GGCGGATGTG ACAAGACCCA ACCAGGCCTC ATGATGTCAA TGGCCAGACT GAATATACCC
TCGGTTTACA TGTATGGAGG AACTACCTTG CCAGGGAATT TCAGGGGTAG GGATATAGCG
ATTGGAGACG TGTATGAGGC AGTGGGAGCT TTCTCTGCTG GGAAGATAAC CGCGGAAGAT
CTTAGGATCA TGGAAGACAA CGCTATTCCC GGGCCTGGAG CCTGTGGAGG GTTATACACA
GCTAACACAA TGGCTATGCT ATCTGAGGCC CTCGGACTTT CACTTCCCGG AAGCTCAGCC
CCTCCAGCAG TAAGCTCCGA TAGAACCAAA TTCGCCAAGG AGACAGGCAG AACGTTGATG
AAGGTTATGG AGATTGGTCT CAAGCCTAGG GACATCCTAA CCTTTGAGGC CTTTGAGAAC
GGGATTGCCC TACTCATGGC CAGTGGAGGT TCCACAAACG GAGTTCTCCA CCTTTTGGCC
ATTGCCCATG AGGCAGGCGT GTCCCTAACC CTGGACGACT TTGATAGAAT AAGCAAGAAG
GTTCCAGAGA TAGTTAACAT GAAGCCTGGA GGGGACTACG TTATGGCTGA CCTCTACAGG
GTTGGAGGAA CTCCCGTTAT CCTGAAGAAG CTATTGGATC GCGGACTACT TCACGGTGAC
ACTATCACGG TAACTGGAAA GACTATGGCC CAAAACTTGT CCGAGTACAA GATACCTGAG
TTTAAACACG ACCATATAGT CAGAGACCTC TCCAATCCCT TCCTTCCTTC AGGCGGAATA
AGGATTCTGA AGGGTAGTTT AGCACCAGAA GGTTCTGTGG TGAAACTGTC CGCTTCAAAG
ATCAAGTACC ATAGGGGACC GGCCAGGGTG TTCAACTCAG AGGAGGAGGC ATTTGAGACA
GTTCTGAAGA AGAAGATAAA CGAGGGAGAT GTCGTGGTAA TAAGGTATGA GGGTCCAAAG
GGAGGTCCAG GTATGAGGGA AATGCTTGCA GTCACTAGCG CAATAGTGGG ACAGGGACTA
GGAGAGAAGG TTGCCCTGGT CACTGACGGT AGGTTCTCGG GAGCAACCAG GGGTCTCATG
GTAGGTCACG TAGCCCCTGA GGCGGCGGTC GGCGGTCCCA TAGCGCTTAT CAGGGATGGC
GACACCATTG TGATAGATGG CGAGAAGGGT AGACTTGATG TGGAACTCTC AGACCAGGAA
CTTAAGAGTA GGGCCAAGGA TTGGACACCC CCAGAACCTA GGTACAAGAC CGGTCTCTTG
GCGCAGTACG CCAAATTAGT TACCTCATCG GCGAGGGGAG CCGTTCTAGT TTAA
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| Protein sequence | MYDKSRSNKV YGGYEKAPNR AFLKAMGLTD DDISKPLVGV AVAWNEAGPC NIHLLGLSQV
VKEGIRELGG TPRTFTAPVL IDGIAMGSES MKYSLVSREV IANTVELTVN GHGYDGFVAL
GGCDKTQPGL MMSMARLNIP SVYMYGGTTL PGNFRGRDIA IGDVYEAVGA FSAGKITAED
LRIMEDNAIP GPGACGGLYT ANTMAMLSEA LGLSLPGSSA PPAVSSDRTK FAKETGRTLM
KVMEIGLKPR DILTFEAFEN GIALLMASGG STNGVLHLLA IAHEAGVSLT LDDFDRISKK
VPEIVNMKPG GDYVMADLYR VGGTPVILKK LLDRGLLHGD TITVTGKTMA QNLSEYKIPE
FKHDHIVRDL SNPFLPSGGI RILKGSLAPE GSVVKLSASK IKYHRGPARV FNSEEEAFET
VLKKKINEGD VVVIRYEGPK GGPGMREMLA VTSAIVGQGL GEKVALVTDG RFSGATRGLM
VGHVAPEAAV GGPIALIRDG DTIVIDGEKG RLDVELSDQE LKSRAKDWTP PEPRYKTGLL
AQYAKLVTSS ARGAVLV
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