| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0701 |
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| Symbol | |
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| ID | 5105307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 638445 |
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| End bp | 639677 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506605 |
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| Product | AAA ATPase |
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| Protein accession | YP_001190800 |
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| Protein GI | 146303484 |
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| COG category | [L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1474] Cdc6-related protein, AAA superfamily ATPase |
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| TIGRFAM ID | [TIGR02928] orc1/cdc6 family replication initiation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00101638 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCACAAA GTGAAACTCA ATTTAACTAT GGAAACTTAG GAAACTCTGT GATCAGAGAG
GCACTAAAGG GGGGTAAGGG TGAGGTAATT AAGAACCCTA AGGTCTTCAT TGACCCCCTG
TCTGTCTTCA CGGATATCCC TTTTAGGGAG GATATAATTA GGGAGACCGC GATAGCGGTC
AGGTACTTCG TGAAGAACGA CGTTAAGTTT TCGAACCTAT TTCTAGGTTT AACTGGGACC
GGGAAAACCT TTGTGGTCAA GTACATCTAT AACGAGATTG AGGAGGTCAA GAAGGAGGAT
CCAGATTACA GTGGGGTAAA ACAGGTTTAC CTGAACTCAA GGGAGGTTGG GGGAACCCCT
CAAGCGGTCC TTTCAGTGAT AGCTGAAAAG CTCACAAATA GCCTCGTTCC AAGACACGGA
GTTAATCTGG GCGAGTATAT TGACAAGATA AAGAGCGTCC TAAGAGGAAA GAAGGCCATC
ATCTACCTCG ACGAGGTTGA TACCCTCGTG AAAAGAAGGG GAGGAGATAT TGTGCTCTAT
CAGCTGTTGA GGGCAGACGC GGACGTGTCA GTGATCATGA TCAGTAACGA TATCAACGTC
AGGGATTACA TGGAGCCCAG GGTTTTATCG TCGCTAGGTC CGTCGGTCAT TTTCAAGCCC
TATGACGCTG TACAGCTAAA GGAGATCCTC GCGAAGTATG CGGAGTATGG CTTGATTGAC
GGAACTTTCA ATGACGAGAT CCTCTCCTAT ATTGCTGCTA TATCGGCGAG GGAACATGGG
GATGCGAGAA AGGCGGTCAA TCTTCTCTTC AGATCGGCCC AATTAGCCTC AGGGATAGGT
TTCATTAAGA AGGAGCATGT GGATAAGGCC ATCGTAGAGT ATGAGCAGGA GAGGTTGTTT
GAGGCCGTCA AGTCGCTCCC CTTCCACTAT AAGCTCGCAT TAAGGGCCAT AGTTACGACG
GAGGATGTGG TCACGGCGCA CAAGGTTTAC TCTAAGTATT GCGACAAGCT CAAGCAGAAG
CCCCTATCCT ACAGGAGGTT CTCGGACATT GTGTCGGAGC TTGATATGTT TGGAATAGTG
AAGATAAAGA TCATGAACAG GGGAAGGGCA GGGGGAATAA GGAAGTACGT GGAGGTTCAT
GACAAGGAAA AGATAATGAA AGCACTTGAC GAGAACCTAG CGGAAGAGAT GGGTTATGAG
TACGACGAAG GGTCCGATGT GGAAACGAGT TAA
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| Protein sequence | MPQSETQFNY GNLGNSVIRE ALKGGKGEVI KNPKVFIDPL SVFTDIPFRE DIIRETAIAV
RYFVKNDVKF SNLFLGLTGT GKTFVVKYIY NEIEEVKKED PDYSGVKQVY LNSREVGGTP
QAVLSVIAEK LTNSLVPRHG VNLGEYIDKI KSVLRGKKAI IYLDEVDTLV KRRGGDIVLY
QLLRADADVS VIMISNDINV RDYMEPRVLS SLGPSVIFKP YDAVQLKEIL AKYAEYGLID
GTFNDEILSY IAAISAREHG DARKAVNLLF RSAQLASGIG FIKKEHVDKA IVEYEQERLF
EAVKSLPFHY KLALRAIVTT EDVVTAHKVY SKYCDKLKQK PLSYRRFSDI VSELDMFGIV
KIKIMNRGRA GGIRKYVEVH DKEKIMKALD ENLAEEMGYE YDEGSDVETS
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