| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0692 |
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| Symbol | |
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| ID | 5105298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 631693 |
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| End bp | 632583 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506596 |
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| Product | SSU ribosomal protein S6P modification protein |
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| Protein accession | YP_001190791 |
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| Protein GI | 146303475 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.136634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000298511 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGCAAAAA TAGCGGTTGT TCATGAATCA CAGAAGGTTA CTGAAGCCTC CAAACAACTG
CTACTGGAAA TAAAGGCGAG GGGTCATACG GCCTACTACA TTAGGGTTTC CAGGATAAAT
TCGTCCATCG GTGGAGACCT TGGAATATCC TACGCTGGAA AGAAACTGGA ATTAGATGGG
GCCCTTATCA GGAACCTGGG CTTCCTCACA ACCATAGAGC AGATGATAAG GAGAGTGGAC
GTGCTTAGGG AAATAGAGAG CCGTGGGGTT ATTACCATGA ATAATGTGGG GTCAATGTTG
CTGGCTAGGG ACAAGTACGC GAGCATTTCA AGGCTCCACA AGGCCGGAAT TCCCGTTCCC
TACACGGCTC TAGTTGAGGA TCCCTTTGAG GTCATGAGAC TTGTGGAGGA ATGGGGAGAG
GTCGTGATAA AGCCCCTTGT GGGGAGCTTA GGTTTGGGAT CCGTGAAGGT ATCAGACCCT
GATATAGCCT TCAGGGTAGC TAAGTCTATC CTGTCAGTAA ATCAGCCTGT TTACGTTCAA
AAATACGTGA AAAAGCCCAA TAGGGACATC AGGGCCTTCG TGGTCGGTGA TAGACTGTTG
GGGAGCATCT ACAGGATATC CCAAGAAAAC TGGAAAACAA ACGTCGCACA GGGCGCACTG
GTGCAGGCAA TATCCTCAGC AGATCTCAGG GAGATCGAGG AAATTAGCGT AAAGGCCACT
AAGGCACTGG GACTGGACTA CTCGGGTGTA GACATAGTGG AGGATCTGGA GGGAGGTTAC
AAGGTGCTGG AGGTGAATGG AGCTCCCATG TGGAAGGGGT TCCAGACTGC AACCTCCCTA
AATCCCGCAA AATACATTGT GAACCTTCTC CTTGAGAAGA TCAGGAAATG A
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| Protein sequence | MAKIAVVHES QKVTEASKQL LLEIKARGHT AYYIRVSRIN SSIGGDLGIS YAGKKLELDG
ALIRNLGFLT TIEQMIRRVD VLREIESRGV ITMNNVGSML LARDKYASIS RLHKAGIPVP
YTALVEDPFE VMRLVEEWGE VVIKPLVGSL GLGSVKVSDP DIAFRVAKSI LSVNQPVYVQ
KYVKKPNRDI RAFVVGDRLL GSIYRISQEN WKTNVAQGAL VQAISSADLR EIEEISVKAT
KALGLDYSGV DIVEDLEGGY KVLEVNGAPM WKGFQTATSL NPAKYIVNLL LEKIRK
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