Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0689 |
Symbol | |
ID | 5105295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 629264 |
End bp | 630073 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640506593 |
Product | 5'-methylthioadenosine phosphorylase II |
Protein accession | YP_001190788 |
Protein GI | 146303472 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0005] Purine nucleoside phosphorylase |
TIGRFAM ID | [TIGR01694] 5'-deoxy-5'-methylthioadenosine phosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000166903 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000263743 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGCTCGG AAAATAGGGC ACAGATTGCA GTAATAGGAG GGTCGGGCCT ATACGATCCC GGAATCTTCT CAAACACGAG GGAGATCAAG GTTTACACGC CGTATGGAGA GCCCAGCGAT TTGATCACGT TGGGGGAACT GGAGGGGAAG GTAGTCGCGT TCCTCCCAAG GCATGGGAGA AGGCACAGGA TCCCTCCGCA CAAGATTAAC TACAGGGCGA ACATATGGGC GTTGAAGGAA CTAGGGGTAA AATGGGTAAT TTCAGTCTCA GCAGTGGGGA GCCTTAACCT GGGATATAAG CCGGGCGAAT TCGTCATACC GGATCAGTTC ATTGACATGA CCAAGAGAAG GGAATACACC TTCTATGACG GTCCAGTTGT GGCCCACGTA TCCATGGCAG AGCCGTTCTG CAACTCCCTT AGGAAAGTGA TTATAGAGAG CGCCAAGAGA CTGAACATAA CAACGCATCC CAAGGGAACT TACATCTGCA TCGAGGGACC TAGATTCTCA ACGAGGGCCG AAAGCTTGGT CTGGAAGGAT GTTTTCAAGG CAGACATAAT TGGTATGACC CTCGTCCCTG AAGTTAATCT AGCTTGTGAG GCAGAGATGT GTTACTCCAC AATAGCAATG ATCACGGATT ACGACGTGTT CGCGGAGGTT CCTGTGACAG CCGAGGAGGT TACCAAGGTA ATGTCGGAGA ACACGGCTAA GGCGAAGGCC CTGCTAAGGG AAGTAATAAG GTCGCTTCCT GAGAAGCCTG ACGAGAGAGA GTGTTCCTGT TGTCACTCCC TGAAGACAGC TCTAGTGTGA
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Protein sequence | MSSENRAQIA VIGGSGLYDP GIFSNTREIK VYTPYGEPSD LITLGELEGK VVAFLPRHGR RHRIPPHKIN YRANIWALKE LGVKWVISVS AVGSLNLGYK PGEFVIPDQF IDMTKRREYT FYDGPVVAHV SMAEPFCNSL RKVIIESAKR LNITTHPKGT YICIEGPRFS TRAESLVWKD VFKADIIGMT LVPEVNLACE AEMCYSTIAM ITDYDVFAEV PVTAEEVTKV MSENTAKAKA LLREVIRSLP EKPDERECSC CHSLKTALV
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