Gene Msed_0685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0685 
Symbol 
ID5105291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp626393 
End bp627208 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content53% 
IMG OID640506589 
Productasparaginase 
Protein accessionYP_001190784 
Protein GI146303468 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1446] Asparaginase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000125075 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000480758 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGATACA ATTCGCCAGT TCTTGTCATT CACGGAGGAG CGGGCTCTTG GAAAAACATG 
GAGAGGGATA GGGCTCTGAA GGCCTTGAGG GAGTCCTTGG AGAGGGGATA TAGGGAATTC
AGGACCGGGA GCTCCTTAGA GGCCGTGGTG GAGGCCATAG CTTCCATGGA AGATAGCGGA
GTATTCAACG CTGGAAGGGG GAGCGTGAAG AACGCAGAGG GAGGAGTGGA GATGGATGCT
GGACTGATGC ACGGTAAGAC CATGTCCGTG GGATCTGTGG CCTCCATTAG GGCCAGAAAC
CCCATAAGGA GAGCCTATGA GGTTCTGAAA CAGGGAAGAC ACGTTCTCAT GGTCAGGACT
GTTTGGGAGG AAACGGAGGA GGGAGATAGC TCCAGGGATG GGGATACCGT GGGGGCCGTA
GCGTTGGATG AACAGGGAAA TCTCTCCGCT GGAACCAGCA CCGGTGGAAT AAGGGGTAAA
TTGCCAGGAC GAGTGGGCGA CTCACCAATA CCCGGGGCTG GATTCTACGC CACGGCCAGG
GTAGCTGTTT CCTGTACTGG AATAGGGGAG CTCATCCTCA AACTACTTCC AGCAAAGGAA
ATAGACATGT TAAGGGCCAT GGGATATCCA CTGGAGGAAT CTGTTAGGGC TGTCATGGGA
AAGTTCACTG AAACCTTCGG TAAGGACAAC CTCGGTTTGA TCGCACTCGA CCATCAGGGT
TACGCCTCAG CATCATTTAA TACCGGCGCA ATGCCAAGAG GAATAATGTG GAACGGAGGA
GAGAAAGTGT TCTTTGATGA GGTAGATCAG CTATGA
 
Protein sequence
MRYNSPVLVI HGGAGSWKNM ERDRALKALR ESLERGYREF RTGSSLEAVV EAIASMEDSG 
VFNAGRGSVK NAEGGVEMDA GLMHGKTMSV GSVASIRARN PIRRAYEVLK QGRHVLMVRT
VWEETEEGDS SRDGDTVGAV ALDEQGNLSA GTSTGGIRGK LPGRVGDSPI PGAGFYATAR
VAVSCTGIGE LILKLLPAKE IDMLRAMGYP LEESVRAVMG KFTETFGKDN LGLIALDHQG
YASASFNTGA MPRGIMWNGG EKVFFDEVDQ L