| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0675 |
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| Symbol | |
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| ID | 5105281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 617512 |
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| End bp | 618384 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506579 |
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| Product | succinate dehydrogenase subunit C |
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| Protein accession | YP_001190774 |
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| Protein GI | 146303458 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2048] Heterodisulfide reductase, subunit B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0161488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000830307 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGTAG CATATTATCC GGGATGTGCA ACCCACGGCC TATCTAAGGA CGTTGATGTG
GCCACAAAGA AGGTGGCCGA GGTTCTAGGA TTGGAACTAG TGGAAGTAGA GGACTGGAAC
TGTTGCGGAG GAGGATTCCT GGACGAATAT GATCAAAAGG CCCATGCTGC CTTGAACCTG
AGAAACTTGT CCCAGGTAGA GAAGATGGGA CTCAACAAAA TGGCAACTCC CTGTAGTGTT
TGCTTGCAAA GTCATAGACT TGCAGTAAAC AACTACAAGG AAGACAAGGA GCTTAGGAAA
GACGTCGATT CCAGGCTCAA ATCCGCCTCC ATAGAGTACA AGGGAACCGT GGATGCTGAG
CATATTGTGT GGGTTTTGGT GAGGGACGTT GGAATTGAGA GGATAAAGTC CCACGTTACA
AGGCCCCTGA CCCAGTTGAA GGTCGGAACA TATTACGGAT GTCAAATGCT AAGGCCTGAG
CAGATCATGG GATTTGAGTC CGCATATAAG CCCCACAGCC TAGAGGATCT AGTATCAGCC
ACTGGAGCAA CTCCAGTGAG GTTCCCCATG GCGACAGCTT GTTGTGGTTT CCCCTTAATG
GGAAGCAATC CCAAGGGAGG ATTGAAGTTA GCCTATAATG TTCTCTCTTC TGCTAAGGGC
GCTGGAGCGG ATATAATGGT ACATCCATGT AGTCTCTGTC ATTTACAACT TGATGTTACC
CAGTTCAAGG TAATGGACGA GTTTAAGACT GGATGGACCA TGCCCACTAT GTACGTTACT
CAACTCCTGG CAATATCCTT TGGAATAAGT CCAAAGGAGC TGGGGCTTAG TAAGATAGCG
ATGAAGGCGC TGGAGGAGAG GGGAATAACA TGA
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| Protein sequence | MKVAYYPGCA THGLSKDVDV ATKKVAEVLG LELVEVEDWN CCGGGFLDEY DQKAHAALNL
RNLSQVEKMG LNKMATPCSV CLQSHRLAVN NYKEDKELRK DVDSRLKSAS IEYKGTVDAE
HIVWVLVRDV GIERIKSHVT RPLTQLKVGT YYGCQMLRPE QIMGFESAYK PHSLEDLVSA
TGATPVRFPM ATACCGFPLM GSNPKGGLKL AYNVLSSAKG AGADIMVHPC SLCHLQLDVT
QFKVMDEFKT GWTMPTMYVT QLLAISFGIS PKELGLSKIA MKALEERGIT
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