| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0672 |
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| Symbol | |
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| ID | 5105278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 615041 |
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| End bp | 615976 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506576 |
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| Product | homoserine kinase |
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| Protein accession | YP_001190771 |
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| Protein GI | 146303455 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0083] Homoserine kinase |
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| TIGRFAM ID | [TIGR00191] homoserine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000904789 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTTCAG TGAAAGCCAC AGCATTCTCA TCTTCTGCTA ACCTTGGTGC CGGTTACGAC
GTGCTTTCCA TGAGCCATTT GGCCTTCAGC GACACTGTTT ACGCGGAGCT TATCAACGAA
AAGGAACGCA GGGTCATGAT GGAGTCCAAC TCGAATGTCC CTTTAGATCC AGCTAGAAAC
TCAGCAGGCG CACCAGTTGA GGCATTGCTC AAGGAATTTC AATTAAATTA CACGATAAAA
CTGAATGTGA TAAAGGGAGT GCCCCACGGA TTAGGCCTAG GAAGTAGCGG AGCATCTGCA
GTGGCTGCAG TGGCTGCGGT TAACGAGCTG CTTAACCTCC ACCTGACGCT CGAGGACATC
GTGAAGTTTG CTGTGATTGG GGAACAAGCC GTTAGTGGAT CCCCTCACCC AGATAACGTG
GCAGCTAGTG CCTTTGGTGG AATAGTGGCA GTGACGTCGC ACGATCCCAT TAGGGTAGTG
AGGATACCAA TTAACCTGAA CTTCAGGTTA ATGTTGGTCA TACCGAGGGT TAATACGGGT
GAAGGGAAGA CCAAGAAGGC AAGGGAGCTA GTTCCCAAGC AGATAGAGGT TTCAAAGATG
GTCGAAAACA CAAGGTTCCT ATCCTCATTC ATTCTAGGAT TAGTTAAGGG AGATAGGGCA
CTGGTTAGGG AGGGGCTTAA CGACGCCGTT GTGGAAAGGT CCAGGGAACC AATGTATCCA
CACTACCCCA AGTTGAAGGA AATAGCACTG AGGTACGATG CTATTGGAGC TTGCGTAAGT
GGAGCCGGAC CTACGGTGTT AATCCTTTAC GATGATTCGA CCAAACTGGG AGAGATCAAA
CAGGAGGGTG GGAAAGTATG TGCCCAGCAC GGTTTTCAAT GCGATTTCAT TACCACGGAA
ATAGGGGAGG GAGTCAGGGT TGAGGGACTC AACTAA
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| Protein sequence | MRSVKATAFS SSANLGAGYD VLSMSHLAFS DTVYAELINE KERRVMMESN SNVPLDPARN
SAGAPVEALL KEFQLNYTIK LNVIKGVPHG LGLGSSGASA VAAVAAVNEL LNLHLTLEDI
VKFAVIGEQA VSGSPHPDNV AASAFGGIVA VTSHDPIRVV RIPINLNFRL MLVIPRVNTG
EGKTKKAREL VPKQIEVSKM VENTRFLSSF ILGLVKGDRA LVREGLNDAV VERSREPMYP
HYPKLKEIAL RYDAIGACVS GAGPTVLILY DDSTKLGEIK QEGGKVCAQH GFQCDFITTE
IGEGVRVEGL N
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