| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0668 |
|---|
| Symbol | |
|---|
| ID | 5105274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 611082 |
|---|
| End bp | 612254 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640506572 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_001190767 |
|---|
| Protein GI | 146303451 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0714] MoxR-like ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00327947 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAACA TAATAGGGAG AATAATAGTG AGTTCATCAC TCCTTGAACT TCCCAAAAAG
TTTTTAGAGT CCCTCTATTC CCCGTTCGTG GGAAGGGAAG AGGAGGCTAA GGTCCTAACG
CTAGCTCTCC TTACAAAGGA GCACGTAGTG CTAATAGGAG AGCCTGGAAC CGCTAAGTCA
GCATTGGCTA GAAGGGCTGC TGATCTCCTT AATGCCAGGT TCTTCATGTA TTTACTTACG
AAATATACAG AACCCGCTGA GCTTTTTGGA GCACTGGACG TCAACGCACT GAAACAGGGA
GTATACAAGA GGATAACAAA GGAGAGACTT CCTGAAAGCG AGTTAGCCTT CCTAGATGAG
ATATTTAATG CCAATTCCGC CATTCTGAAT GCCCTTCTTT CACTGTTGAA CGAGAGGGTA
ATTTATGATG GCTACAACGT TATCAAGGTA CCACTAAGGA CGCTAATCAG CGCAAGTAAT
AGGGTACCGG ACGAGCCAGA ACTTGAGGCC CTTTATGATA GGCTTCTTCT AAGGCATTAC
GCTAAGCCCG TGGGGGAGGA TATGTGGAAG GACTTAATAG ATTCGTCCTG GGAACTCGAG
TTCACAGACA AGTGGAAAGT CAAGGAACCA GTTATGACAG TTCAAGATCT TGACAGGCTT
TACAGTATGC TCTCAGAAGT GGACCTGAGC CAGATCAAGT CGAAACTCCT GAAGCTCTAC
GTAATGTTGG AGGAGAAGGG AGTACACTTA ACTGACAGGA GAAAGGGCAA GGTTCTGAAA
ATAGTGTCGG CTCACGCACT TCTGAACTCT AGAACAAAGG CTACAGAGGA GGACCTAGTA
GTTCTTAAGT ACATAGCCCC AAGGGAAATT GACGATTTCG AAAAGGTCTC AGCACTCCTC
TCTGAGGAGT TAAAGACGCC CATCAAGTAC ATGAGGGAGC TTAACGAGAT ATTTAATAAC
ATTAAGGAGG CAGGGAAATA CGTTGATGCT GCTAACGAAT CTGATCCTAG ATTGATCGAT
TTGATCAGGA GCTTGAGGGC GACAAAGGAC AGGGTAATAT CGTTAGGGAA GGAGAGCGGT
GACGAGAAGG TTGAAGAGTT CTCGCGGGAA GTTGGAGCGG AAATAGATAG ATTAGTAGAA
AAAGTGGGGA GGAAGCTGGG GATTTACACA TGA
|
|---|
| Protein sequence | MVNIIGRIIV SSSLLELPKK FLESLYSPFV GREEEAKVLT LALLTKEHVV LIGEPGTAKS
ALARRAADLL NARFFMYLLT KYTEPAELFG ALDVNALKQG VYKRITKERL PESELAFLDE
IFNANSAILN ALLSLLNERV IYDGYNVIKV PLRTLISASN RVPDEPELEA LYDRLLLRHY
AKPVGEDMWK DLIDSSWELE FTDKWKVKEP VMTVQDLDRL YSMLSEVDLS QIKSKLLKLY
VMLEEKGVHL TDRRKGKVLK IVSAHALLNS RTKATEEDLV VLKYIAPREI DDFEKVSALL
SEELKTPIKY MRELNEIFNN IKEAGKYVDA ANESDPRLID LIRSLRATKD RVISLGKESG
DEKVEEFSRE VGAEIDRLVE KVGRKLGIYT
|
|---|
| |