| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0651 |
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| Symbol | |
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| ID | 5103811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 596670 |
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| End bp | 598517 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640506555 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001190750 |
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| Protein GI | 146303434 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.219631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCAT TAAAGGGACT CAGAAGGAAT GCGGGTAATA AGAAAGAAGC GAAGCCATCA
ATCGGGATAA TGGGAAACTT TTACGAATTA GGAATAGTTA AGTCTATTGC TAGAAGTATA
GAGAAAAAAT TACTTTTAGC AGGTCTCAGT ACCGATCCTC AGCTCTTTGC CGCTCAAATG
TTCTTCTATC TGATGGTATC ATCAGTCTTT TCGGCAATTC TTGCCTTTCT AGGAGTTTAC
GTCCTCGTTA AGCTCTATCT AGTATTCAGG GTAGCTAAGT TTGCAGTCGC AGGTCTAATG
TTTATCATTT TCGCAGCCAT AATACCTCCA GTTACGTATC TTCTGTTGAA TGTGAATATA
TCTCAGAACA TAGAAAACAG GAGAATAGGT ATAGATGCCG AAACTGCCGC CTTCTCAGCA
GTTTTTACAA TTTTCCTCAG ATCAGGCTTG AGTCCTAGGA TACTTTTCGA TAGAATCTCC
AGAACCATAG CGTTCAATTA CATAAATCAG GTCCTTCTTT ACGTCTCTAA GAGGATAAAC
TTTCTTGGAG AAAACGTGGA GGACGCCTTG CTTCACGCAA TAAGAATCTC TCCCTCTAAG
ATTCTGAATG ATTTCTTTGT TAGCTATGTT GCAGCAGTGA GAAGCGGTGC GCCTGTCTTA
GATGCAGTAT CTGCTAAGGC TAAGGATATC CTTAAACAAC TCGAGCTGGG CGCTGCCTTG
GCTGCGGATA GGCTTTCAGG AGTTGGCGAA ACTTACGTAA TCTGGCTAGC CTCGGGTTAC
ATCACGTTCT TTCTGATATT ATTGTTGCAG GCTCTCTTCC CCAGCATAGT GGGAAGTTCT
ATCCCCCTTA ACGCCTTCGG AGCTATCCTG ATTCTGATAT TGCCCCTAGT AGATGGGGTT
TTCATTTTAA TGGCAGAACA GTCACAACTT AGGTTTCCAG AGAGAAAGAT CTCATCGTAC
AAGACGTTCT ATATCTCACT AGGTGTGGGT CTTGTTGTAA TGTTTGTTCT TCTAGGCGTA
ACTAAGCAAC TTATTCCCTT TGTTACACTT ACAGGGAATA TTAGCAATGT CACGCCAGTA
ACTATCATCA TACTAATTGG TTTCCTGATA GCGGCTATTC CGCCTGCAAT TGTCACGTCT
AGAGAGTTGA AAAAGGGAAC AGGCTATGAC CCTTACGTGG TTAACTTGCT TCGAGCAATT
TCTGAAGGCA TAAGGGCAGG ATTGTCACCA GAGACGATAA TTAAGAACAT AAAAGAGAGC
CAGGAGATGG GGAAATTATC GTATATATTG AAAAGGATTT ACGCATATAT CTCGCTAGGT
TACCCGCTTA GAGATGCATT CCTAAAGGGA GCCGAGGAAA TAGTCGATTT TACGTCAAGG
ATTTCTCTAG TTTCTATGGC AGATATGATT GATATAGGTA GCCTCACCCC AGAAAGCATA
GAAAGTCTAG CTGAACAGGT AGAGACGCAG ATAAAGATAA AGAGAGAATA TGAAAGTAAG
GTCAAGATAC TTCTCTATAC TCCCTACATT GGTGTAATTA TCTCCATAAT AGCGGTAAAC
CTGCTTTCGG CGGCAATACT AGGCCTTATA ACGGGCAACG CATATGCTTT CTCCTCGGGT
GCACTTGGAG AGGCTAGAGT CCTCCTACCA CAGGCTGTTT ACATTACTGC AATAGCCTCA
ATGATAAACG CGTTCTTTGC AGGACTACTG GTAGGAAAGT TGGGAAAGGG TAAAGTAGCA
ACAGGTTTCA TTCACGCAGC AATTATGGTA GCAATAACTG CAATATTAAT GATTATAATA
GTTCATGTTC ACTTTACTTT CGGACCAACT GTACCTCCTT CAGGATAA
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| Protein sequence | MMALKGLRRN AGNKKEAKPS IGIMGNFYEL GIVKSIARSI EKKLLLAGLS TDPQLFAAQM
FFYLMVSSVF SAILAFLGVY VLVKLYLVFR VAKFAVAGLM FIIFAAIIPP VTYLLLNVNI
SQNIENRRIG IDAETAAFSA VFTIFLRSGL SPRILFDRIS RTIAFNYINQ VLLYVSKRIN
FLGENVEDAL LHAIRISPSK ILNDFFVSYV AAVRSGAPVL DAVSAKAKDI LKQLELGAAL
AADRLSGVGE TYVIWLASGY ITFFLILLLQ ALFPSIVGSS IPLNAFGAIL ILILPLVDGV
FILMAEQSQL RFPERKISSY KTFYISLGVG LVVMFVLLGV TKQLIPFVTL TGNISNVTPV
TIIILIGFLI AAIPPAIVTS RELKKGTGYD PYVVNLLRAI SEGIRAGLSP ETIIKNIKES
QEMGKLSYIL KRIYAYISLG YPLRDAFLKG AEEIVDFTSR ISLVSMADMI DIGSLTPESI
ESLAEQVETQ IKIKREYESK VKILLYTPYI GVIISIIAVN LLSAAILGLI TGNAYAFSSG
ALGEARVLLP QAVYITAIAS MINAFFAGLL VGKLGKGKVA TGFIHAAIMV AITAILMIII
VHVHFTFGPT VPPSG
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