Gene Msed_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0648 
Symbol 
ID5103808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp593115 
End bp593630 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content46% 
IMG OID640506552 
Productinorganic pyrophosphatase 
Protein accessionYP_001190747 
Protein GI146303431 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.357971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0915916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTAG GTCCAGGGAA GAAAGCTCCT GAAATAGTAA ATGTTCTTGT GGAGATTCCA 
AGTGGTTCCA ACATAAAGTA CGAGTATGAT GAAGAAGAGG GAGTAATCAA GGTGGACAGG
GTTCTCTACA CCTCCATGGT TTATCCCTTC AACTACGGTT TCGTGCCGGG CACTCTAGAA
GAGGACGGTG ACCCCATAGA CGTGCTAGTT CTAACCAATT ATCCACTGTT TCCTGGCACA
GTCATCGAGG TTAGGCCAGT GGGAGTAGTT CATATGAAAG ACGAAGAAGG GGTGGACGAA
AAGATAATAG CGGTCCCCAA GGAGAAAACA GATCCCACCT TTGCCAGAAT TAAAGACATT
ACAGATATAG ACGACGCTAC CAAGAACAAG ATAGTTCACT TCTTTGAACA TTACAAGGAG
TTGGAGCCCG GTAAGTGGGT AAAAATCTCT GGCTGGGGAT CGGCTTCCGA GGCTAAGGAG
AAAATAGCCA AGGCGATAGA GAGGAAGAAC AAGTAA
 
Protein sequence
MNLGPGKKAP EIVNVLVEIP SGSNIKYEYD EEEGVIKVDR VLYTSMVYPF NYGFVPGTLE 
EDGDPIDVLV LTNYPLFPGT VIEVRPVGVV HMKDEEGVDE KIIAVPKEKT DPTFARIKDI
TDIDDATKNK IVHFFEHYKE LEPGKWVKIS GWGSASEAKE KIAKAIERKN K