Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0648 |
Symbol | |
ID | 5103808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 593115 |
End bp | 593630 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640506552 |
Product | inorganic pyrophosphatase |
Protein accession | YP_001190747 |
Protein GI | 146303431 |
COG category | [C] Energy production and conversion |
COG ID | [COG0221] Inorganic pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.357971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0915916 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTAG GTCCAGGGAA GAAAGCTCCT GAAATAGTAA ATGTTCTTGT GGAGATTCCA AGTGGTTCCA ACATAAAGTA CGAGTATGAT GAAGAAGAGG GAGTAATCAA GGTGGACAGG GTTCTCTACA CCTCCATGGT TTATCCCTTC AACTACGGTT TCGTGCCGGG CACTCTAGAA GAGGACGGTG ACCCCATAGA CGTGCTAGTT CTAACCAATT ATCCACTGTT TCCTGGCACA GTCATCGAGG TTAGGCCAGT GGGAGTAGTT CATATGAAAG ACGAAGAAGG GGTGGACGAA AAGATAATAG CGGTCCCCAA GGAGAAAACA GATCCCACCT TTGCCAGAAT TAAAGACATT ACAGATATAG ACGACGCTAC CAAGAACAAG ATAGTTCACT TCTTTGAACA TTACAAGGAG TTGGAGCCCG GTAAGTGGGT AAAAATCTCT GGCTGGGGAT CGGCTTCCGA GGCTAAGGAG AAAATAGCCA AGGCGATAGA GAGGAAGAAC AAGTAA
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Protein sequence | MNLGPGKKAP EIVNVLVEIP SGSNIKYEYD EEEGVIKVDR VLYTSMVYPF NYGFVPGTLE EDGDPIDVLV LTNYPLFPGT VIEVRPVGVV HMKDEEGVDE KIIAVPKEKT DPTFARIKDI TDIDDATKNK IVHFFEHYKE LEPGKWVKIS GWGSASEAKE KIAKAIERKN K
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