Gene Msed_0633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0633 
Symbol 
ID5103793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp578859 
End bp579650 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content48% 
IMG OID640506537 
ProductD-fructose 1,6-bisphosphatase 
Protein accessionYP_001190732 
Protein GI146303416 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0478031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.599874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGAA CTATCCTGGA AAGGATCTCC GCGGAGGCAA CGAAGTACCT ACGAGAGATG 
AGCGGAAGGG AGGGGATAGA CAGGGTACTG GGTACACACG AAGATGACAC CACGAAGGTA
ATAGATAAAC TTGCAGAGGA TTTTATACTG GAGAAGCTCA ACGAAACTGG TCTCCCAATA
ACATACGTTA CTGAGGAAAC TGGAACCATA AGAAAGGAAG GGTCGGAATA CGTCGCCGTG
ATCGATCCAC TCGATGGTAG CACGAACTTT CTTAACGGTA TAACCTGGGC TGCAGTCTCG
ATCTCTGTCT ACTCCTCAAA GGGAGCTCCG GTTGCAGGAA TAGTGGGAGA AATATTCTCT
GGGAAGACCT ATTCATACGA CGAGAGGGGG GCGTACATTA ACGGGGAGAG AGTTGAGAGG
GTGTCCTCTC CCAAGCAGAG GATAGTTCTT CCCTACTTTG ATAGGAGCAG ACTGAGGGAG
ATCACCCAGG TACTTTCAGC AATAGAGGGG AACTATAAAA CCAGAAATCT AGGTGCAGCT
TCGCTGGACA TGTTGCTTGT CTGCACGGGA AGGGCTTACC TCTTCGTTGA TGTCAGAAAC
AAGCTCAGAA ACGTGGATAT AGCCTCATCA CTAAATTTCT GCGAGAAGGT GAACATATCC
CCCTTCAGTC TTGAAGGGGA AAGAATAAGG ATAGACCTGG AAAAGGTCTC GGTCGTGAAG
AACGTACTGG TTACTCCTGA CTCTTCGCTT TCTCAACGGA TTTTATCAGC GTGGAAGGCC
TTACCTTCTT GA
 
Protein sequence
MMRTILERIS AEATKYLREM SGREGIDRVL GTHEDDTTKV IDKLAEDFIL EKLNETGLPI 
TYVTEETGTI RKEGSEYVAV IDPLDGSTNF LNGITWAAVS ISVYSSKGAP VAGIVGEIFS
GKTYSYDERG AYINGERVER VSSPKQRIVL PYFDRSRLRE ITQVLSAIEG NYKTRNLGAA
SLDMLLVCTG RAYLFVDVRN KLRNVDIASS LNFCEKVNIS PFSLEGERIR IDLEKVSVVK
NVLVTPDSSL SQRILSAWKA LPS