Gene Msed_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0624 
Symbol 
ID5105596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp573268 
End bp573756 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content45% 
IMG OID640506528 
Producthypothetical protein 
Protein accessionYP_001190723 
Protein GI146303407 
COG category[R] General function prediction only 
COG ID[COG1634] Uncharacterized Rossmann fold enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCTAG TGGGAGCTGG TCCATCCCTG GAACGTGTTA ACGAGATTAG GGGCGATGTC 
ATAGTCTCAG CTGATGGTGC AACTAATTAT CTTGTGAAGA GGGGGATAAT CCCGGATGTG
GTTGTCACGG ATCTAGATGG GTTGATGACC TTTCCAGACT CAATGTACGT GGTTCATGCC
CATGGGGATA ACATGCCTCT GCACTGGAAA TTAGGGATGA TGAGGAGTGT GATAGGCACA
ACTCAGGTTT ACCCCTTTGG AAGACTGAAG TTATATGGTG GTTTCACAGA TGGGGATAGG
GCCTTCGTTT TGGCGAAAAC CTTCAATGCA AGATCAATTA GGCTCTACGC CATGGATCTG
GACTCAGATT TCATAGGCAT GTACTCTAAA CCCTTTCTAA GGGAGAACGT ACCCATGACT
TACATGAAGA GAAGAAAACT CCACATAGCA AAAGAAATTA TTCATACCCT AACTAGGAAA
GATTTATAA
 
Protein sequence
MALVGAGPSL ERVNEIRGDV IVSADGATNY LVKRGIIPDV VVTDLDGLMT FPDSMYVVHA 
HGDNMPLHWK LGMMRSVIGT TQVYPFGRLK LYGGFTDGDR AFVLAKTFNA RSIRLYAMDL
DSDFIGMYSK PFLRENVPMT YMKRRKLHIA KEIIHTLTRK DL