| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0615 |
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| Symbol | panB |
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| ID | 5105587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 567115 |
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| End bp | 567903 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506519 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_001190714 |
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| Protein GI | 146303398 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.835202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAAGGT TAACAATTCG GGATTTCCTG AAAAAGAAGG GGAAAGAAAA GATAACCATG
TTGACAGTGT ACGACTACTC CATGGCAAAG ATCCTGTCGG AGACTGAAGT GGACGGGTTT
CTAGTCGGGG ACTCATTGGG AATGAACGTG TTGGGGTTTC CCTCTACTCT CCAGGTTACC
ATGGACCATA TGATTCATCA CACCAGGGCC GTAGTGAGAG CCTCCCCGAG GCAGTTAATA
GTCGTGGATA TGCCCTTCAT GAGCTACGAG CCCTCCAATG AAGTTGCAGT TAAGAACGCA
GGTATTCTGG CTAGCGAGGG CGCGGACGCC GTGAAGCTCG AGGGAGGAGT AGAGGTTTAT
GAAAGGGTAG CAAACATCGT TAAGTTCGGG GTTCCCGTTA TGGGGCATAT AGGCCTTACA
CCACAAAGGT ATCTCACTCT AGGTGGTTAC AGAACTGTGA AGGACGAGGC AAAACTGATC
TCGGACGCAT TGGCCTTGGA AGAGGCAGGG GCGTTCTCCA TCGTAATAGA GAACGTTTAC
GCCGAAATAG CCAAGAAAAT AACGGAGAAG GTGTCCATAC CCACAATCTG CATAGGTGCA
GGTCCCCACT GCGATGGTCA GGTTCTAGTG ATACATGACC TCTTAGGAAT GGGAGATATA
CAGCCATATT TCTCCAGGAA GTATCTAGAC CTGAAGGCTG AGATACGTGA AGCTGTGAAA
AGATACATTA ACGACGTAAA AACGGGAACC TTTCCAGGAA GGGAGAACTA TAAGTCTAGG
GAGAGCTGA
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| Protein sequence | MQRLTIRDFL KKKGKEKITM LTVYDYSMAK ILSETEVDGF LVGDSLGMNV LGFPSTLQVT
MDHMIHHTRA VVRASPRQLI VVDMPFMSYE PSNEVAVKNA GILASEGADA VKLEGGVEVY
ERVANIVKFG VPVMGHIGLT PQRYLTLGGY RTVKDEAKLI SDALALEEAG AFSIVIENVY
AEIAKKITEK VSIPTICIGA GPHCDGQVLV IHDLLGMGDI QPYFSRKYLD LKAEIREAVK
RYINDVKTGT FPGRENYKSR ES
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