Gene Msed_0610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0610 
Symbol 
ID5105582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp562310 
End bp562822 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content45% 
IMG OID640506514 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001190709 
Protein GI146303393 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.579224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.873609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCT ACGAGAAAGA TCAAAAGGTT AAAATAAACC TGAAAGTTAA CGGTAAGGAA 
ATTGAGACTG AGGTAGAACC CCGTAGACTA CTTGTTCACG TTCTTAGGGA CCTAGGATTC
ACCGGAGTTC ACATAGGTTG CGATACATCA AACTGTGGAG CATGCACAGT TCTACTCAAT
GGAAAGAGCG TTAAATCATG CACCCTTCTC GCAGTTGAGG CCAATAACTC GGAGATAACC
ACAATTGAGG GTTTAGCTAA GGATGGAAAG CTTCACCCAG TCCAAGAGGC CTTCTGGGAT
AAACATGCCT TACAATGTGG GTATTGCACC CCTGGTATGA TAATGCAAAG CGTCTGGCTC
CTCAAGGAGA ATCCTAATCC CACGGAGGAG GAAATTAGGG AAGGCATCTC AGGGAACCTT
TGCAGGTGTA CAGGATATCA GAACATTGTT GAGGCGATTA AGACAGCCGC CGAGAAACTT
CGATTAGATC AGCCTCTGTA TCAACGTCAA TAA
 
Protein sequence
MKVYEKDQKV KINLKVNGKE IETEVEPRRL LVHVLRDLGF TGVHIGCDTS NCGACTVLLN 
GKSVKSCTLL AVEANNSEIT TIEGLAKDGK LHPVQEAFWD KHALQCGYCT PGMIMQSVWL
LKENPNPTEE EIREGISGNL CRCTGYQNIV EAIKTAAEKL RLDQPLYQRQ