| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0583 |
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| Symbol | |
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| ID | 5103743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 537414 |
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| End bp | 538745 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506487 |
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| Product | DNA repair helicase RAD25 |
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| Protein accession | YP_001190682 |
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| Protein GI | 146303366 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.71742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.481027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTACATC TGAAATATTT TAGGGGTCTG CTCATCTCCG ATCACTACGC GCCATCACTG
AGTTGGAACG AGGAGTTTAA GGCTTACATT GCCCCAGCCT ACAGGTATTA TCAGGTGCTT
GAGTACTTCC GACAGGGAGG GATAGAGGTA AAGGATGAGG TAATGGACCC CATCCCCTTT
CCTCTCGTGA AGGACTCCCT GAAACTTAGG GATTATCAGG AAAGGGCCAT GAAGGCTTGG
ATGGCCAAGA AGAGGGGAGT CTTGGTATTA CCCACGGGTG CAGGTAAAAC GGCCTTGGGC
ATAAAGGCTA TTGCCAATCT TAGGGTGGCA ACGCTCGTAG TGGTTCCCAC GATAGAGTTA
CTTCATCAGT GGGGTGATAG GATTAGGGAG TCCCTGGGCG TTGAACCGGG AATTGTGGGA
GGAGGAGAGG AGAACATTCA GGGAATTACC GTGATTACCT ACGATTCTGC CTACACAAAG
GTGGAGAAGC TGGGTAACAG GTTTCCTCTC GTAATATTTG ATGAGGTGCA TCATCTCCCC
TCAACAGGTT ACATTAACAT AGGGGAGTTG ATGGCCTCGC CTTACAGGAT GGGACTAACT
GCTACTCCGG AGAGGGAAGA TGGTAGGCAT GTCCTCCTGA GGGAGGTAGT GGGTCCCATC
CTAATCAGGC TCTCTCCATC ACAGCTAGCA GGGAAGTACC TGGCAGAGTT CAAGGTCGAG
AAGATTTATG TGGAGCTAAC CCCGGAGGAG AGGGAAATTT ACGAGAAGCT AAGGAACAGG
TTTACCTCCT TTCTAAGAAA GAGAAAAATA AGGATGGCCG GCCCTAGGGA CTTTCAGAGA
TTCATCTTCA TGGCTGGAAG GGATAAGGAA GCTAGGGAGG CTCTACTGGC CTGGAACGAG
TCATTGAGGC TTGCTGTGAA CTCGGAAAGT AAACTGATCA AGTTAAGGGA GATCCTGAAG
GAACGCGCCA ATGAGAAGAT CATCATCTTC ACAAGGGATG TGGACATGGC CTACAGGGTC
TCTAGGGAGT TCTTGGTTCC CGCGGTTACC TACCTCACGT CGAAGGACGA AAGGCAGGAC
ATCCTTTCCA AGTTCAAGAA CGGTGATTAC AAGGTGATAG TTGCATCCAA TGTCTTTGAT
GAAGGTGTAG ACGTTCCCGA CGCAAGTGTG GGTATAGTTT TAGGCGGTTA CGGAACATCT
AGGCAGATGA TGCAAAGGTT AGGGAGGATC TTGAGGAAAA AAGAGGGAAA GGTTGCCACT
CTCATAGAGA TTGTGACCAA GGGTACCACT GATCATAACT TGAGCAGGAG GAGATCCAGT
GCTACCAAGT GA
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| Protein sequence | MVHLKYFRGL LISDHYAPSL SWNEEFKAYI APAYRYYQVL EYFRQGGIEV KDEVMDPIPF
PLVKDSLKLR DYQERAMKAW MAKKRGVLVL PTGAGKTALG IKAIANLRVA TLVVVPTIEL
LHQWGDRIRE SLGVEPGIVG GGEENIQGIT VITYDSAYTK VEKLGNRFPL VIFDEVHHLP
STGYINIGEL MASPYRMGLT ATPEREDGRH VLLREVVGPI LIRLSPSQLA GKYLAEFKVE
KIYVELTPEE REIYEKLRNR FTSFLRKRKI RMAGPRDFQR FIFMAGRDKE AREALLAWNE
SLRLAVNSES KLIKLREILK ERANEKIIIF TRDVDMAYRV SREFLVPAVT YLTSKDERQD
ILSKFKNGDY KVIVASNVFD EGVDVPDASV GIVLGGYGTS RQMMQRLGRI LRKKEGKVAT
LIEIVTKGTT DHNLSRRRSS ATK
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