Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0582 |
Symbol | |
ID | 5103742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 535982 |
End bp | 537427 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640506486 |
Product | hypothetical protein |
Protein accession | YP_001190681 |
Protein GI | 146303365 |
COG category | [S] Function unknown |
COG ID | [COG3372] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.566185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.500457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTACCAA GTGAACTTGC CAGGTTCAGG ATTTACGGAG ACGTTATCTA TCCCTCATTC GCTGGGGAAA GGGAAGTTGA ACTAGTCAAG GAGATGATTC CCTTCTATAA GGTTGGGATC ACGTACGGTG AGGTTGAGGA GAACGTAAAA CTCATGGAAA GGATGTACGG TAAGACGACT CAGGGAGCTA AGCTGGTGAG AGGTCTTCAT AGGGTCATCT CGAGGTACCT TACCCTATCT GGTGAATCTC CCGTGGATCC CAGGAAGATA AGGGAGGAGC TCTTTGCTAA GGGACCTGCC CTGACTCCAG AGGAAAGGGA AAGGAGACTA AGGGAGGTAA GCGAAAGGCT AGGGGTAGAC GCTGAGAGGT TCATGTTTGG GGATATGGAT GAGAGCAAGG TAATCTCCAG GGTTGAGATA CCGCCTCCGG AGGACATAGT TAAGGAGTAT AACCTTTCCC TACTGCAGAC AATACTTTTC AGGTCGTACA AGGTAACCTT GACCACTGAG GGGAACTGGA AGGAACTTCT GAGAACTGTA AAGAGACTTG GGTTGATGTA TACTGCGTAC TCTAACCCCG TGAGGATAGA GGTGATGGGT CCCTATACCC TTCTGAAGCC CTCAGAGAAA TACGGAAGGA ATCTGGCTAT CCTGGTTCCT TACGTGATTG GGACTGGAGG ATGGAGCATT GAGGCTGAAA TCATTCTAGG AAAGAGGAAG AGAAGGGTTT ACCAGATGAA GGTAAGCAAC AACGAATGGA TTGGAGGAAG GCCAGAACAG GGAAAGCTCT TTGATAGTTC AGTGGAGGAG GACTTCTACT GGAACTTCAG GGGAACAATC AAGGATTGGA AACTGGAAAG GGAACCTGGA CCGCTCGTGG TCAACGGCAG GATATTCCTC CCCGATTTCC TAGCTATCAA GGACGAGATA AGGGTCTACC TTGAGGTTGT GGGCTTTTGG ACAGAGGAAT ACCTGAGGGA GAAGGTTAAG AAGCTTCAGG GAACTCAAGC TCTCGTTATA CCCATTGTGA GTGAGGAACT TGGATCCGGG AAGATAGGCG ATTTACCAGT TATTACTTTT AAGAGAAAGA TTGATCCAAC CAAAGTTTAC CGTGTTTTAA GGGAAATTGA GCAGTCGCTC CCAACTAAGA AGGTTGAATA TGAGCTAGAT GGGAGTGACG TAATATCCAT AAAGGAGCTG GCGATGAAGT ATGGTATCTC TGAGAATCTC CTCCGAAAAA ATCTGAGGGA ATTTCCAGGT TACGTTCTTC TCAAAAACTA CTACGTAAGC CAGAAGCTTA TGGAACAACT CTCCAGGGAG AATTTTTCAG GTAGAAAACT TCAGGAAGTC GTGAAGGAGA GAGGAGATTT CATAACCGAG GTCTTGGATA AGCTAGGATA TAAGATAAAG TGGATAAACA TTGCAGACGC GGTGATCACA AAGTGA
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Protein sequence | MLPSELARFR IYGDVIYPSF AGEREVELVK EMIPFYKVGI TYGEVEENVK LMERMYGKTT QGAKLVRGLH RVISRYLTLS GESPVDPRKI REELFAKGPA LTPEERERRL REVSERLGVD AERFMFGDMD ESKVISRVEI PPPEDIVKEY NLSLLQTILF RSYKVTLTTE GNWKELLRTV KRLGLMYTAY SNPVRIEVMG PYTLLKPSEK YGRNLAILVP YVIGTGGWSI EAEIILGKRK RRVYQMKVSN NEWIGGRPEQ GKLFDSSVEE DFYWNFRGTI KDWKLEREPG PLVVNGRIFL PDFLAIKDEI RVYLEVVGFW TEEYLREKVK KLQGTQALVI PIVSEELGSG KIGDLPVITF KRKIDPTKVY RVLREIEQSL PTKKVEYELD GSDVISIKEL AMKYGISENL LRKNLREFPG YVLLKNYYVS QKLMEQLSRE NFSGRKLQEV VKERGDFITE VLDKLGYKIK WINIADAVIT K
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